Gene : Brara.G02890 B. rapa FPsc v1.3
Defline:  (1 of 3) 6.3.5.5 - Carbamoyl-phosphate synthase (glutamine-hydrolyzing) / Glutamine-dependent carbamyl phosphate synthetase Genomic Order:  2890
Name:  ? Brara.G02890 Secondary Identifier:  ? PAC:30635675
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGSYNBSUB-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ARGSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc CITRULBIO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLUTAMINDEG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY0-162 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4984 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5686 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7211 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02890 0.5kb upstream 0.5kb upstream 2903 true A07: 23132841-23135743 Brassica rapa FPsc
Brara.G02890 0.5kb upstream 0.5kb upstream 500 false A07: 23132841-23133340 Brassica rapa FPsc
Brara.G02890 0.5kb downstream 0.5kb downstream 2903 true A07: 23133341-23136243 Brassica rapa FPsc
Brara.G02890 0.5kb downstream 0.5kb downstream 500 false A07: 23135744-23136243 Brassica rapa FPsc
Brara.G02890 1.0kb upstream 1.0kb upstream 3403 true A07: 23132341-23135743 Brassica rapa FPsc
Brara.G02890 1.0kb upstream 1.0kb upstream 1000 false A07: 23132341-23133340 Brassica rapa FPsc
Brara.G02890 1.0kb downstream 1.0kb downstream 3403 true A07: 23133341-23136743 Brassica rapa FPsc
Brara.G02890 1.0kb downstream 1.0kb downstream 1000 false A07: 23135744-23136743 Brassica rapa FPsc
Brara.G02890 2.0kb upstream 2.0kb upstream 4403 true A07: 23131341-23135743 Brassica rapa FPsc
Brara.G02890 2.0kb upstream 2.0kb upstream 2000 false A07: 23131341-23133340 Brassica rapa FPsc
Brara.G02890 2.0kb downstream 2.0kb downstream 4403 true A07: 23133341-23137743 Brassica rapa FPsc
Brara.G02890 2.0kb downstream 2.0kb downstream 2000 false A07: 23135744-23137743 Brassica rapa FPsc
Brara.G02890 5.0kb upstream 5.0kb upstream 7403 true A07: 23128341-23135743 Brassica rapa FPsc
Brara.G02890 5.0kb upstream 5.0kb upstream 5000 false A07: 23128341-23133340 Brassica rapa FPsc
Brara.G02890 5.0kb downstream 5.0kb downstream 7403 true A07: 23133341-23140743 Brassica rapa FPsc
Brara.G02890 5.0kb downstream 5.0kb downstream 5000 false A07: 23135744-23140743 Brassica rapa FPsc
Brara.G02890 10.0kb upstream 10.0kb upstream 12403 true A07: 23123341-23135743 Brassica rapa FPsc
Brara.G02890 10.0kb upstream 10.0kb upstream 10000 false A07: 23123341-23133340 Brassica rapa FPsc
Brara.G02890 10.0kb downstream 10.0kb downstream 12403 true A07: 23133341-23145743 Brassica rapa FPsc
Brara.G02890 10.0kb downstream 10.0kb downstream 10000 false A07: 23135744-23145743 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372919 5261 Brassicaceae View MSA
123839532 5264 Brassicales-Malvales View MSA
124338612 5266 SBM View MSA
124252256 5268 Malvidae View MSA
124069141 5270 Rosid View MSA
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier