Gene : Brara.G02581 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23335:SF1 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 Genomic Order:  2581
Name:  ? Brara.G02581 Secondary Identifier:  ? PAC:30634058
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02581 0.5kb upstream 0.5kb upstream 5605 true A07: 21344727-21350331 Brassica rapa FPsc
Brara.G02581 0.5kb upstream 0.5kb upstream 500 false A07: 21344727-21345226 Brassica rapa FPsc
Brara.G02581 0.5kb downstream 0.5kb downstream 5605 true A07: 21345227-21350831 Brassica rapa FPsc
Brara.G02581 0.5kb downstream 0.5kb downstream 500 false A07: 21350332-21350831 Brassica rapa FPsc
Brara.G02581 1.0kb upstream 1.0kb upstream 6105 true A07: 21344227-21350331 Brassica rapa FPsc
Brara.G02581 1.0kb upstream 1.0kb upstream 1000 false A07: 21344227-21345226 Brassica rapa FPsc
Brara.G02581 1.0kb downstream 1.0kb downstream 6105 true A07: 21345227-21351331 Brassica rapa FPsc
Brara.G02581 1.0kb downstream 1.0kb downstream 1000 false A07: 21350332-21351331 Brassica rapa FPsc
Brara.G02581 2.0kb upstream 2.0kb upstream 7105 true A07: 21343227-21350331 Brassica rapa FPsc
Brara.G02581 2.0kb upstream 2.0kb upstream 2000 false A07: 21343227-21345226 Brassica rapa FPsc
Brara.G02581 2.0kb downstream 2.0kb downstream 7105 true A07: 21345227-21352331 Brassica rapa FPsc
Brara.G02581 2.0kb downstream 2.0kb downstream 2000 false A07: 21350332-21352331 Brassica rapa FPsc
Brara.G02581 5.0kb upstream 5.0kb upstream 10105 true A07: 21340227-21350331 Brassica rapa FPsc
Brara.G02581 5.0kb upstream 5.0kb upstream 5000 false A07: 21340227-21345226 Brassica rapa FPsc
Brara.G02581 5.0kb downstream 5.0kb downstream 10105 true A07: 21345227-21355331 Brassica rapa FPsc
Brara.G02581 5.0kb downstream 5.0kb downstream 5000 false A07: 21350332-21355331 Brassica rapa FPsc
Brara.G02581 10.0kb upstream 10.0kb upstream 15105 true A07: 21335227-21350331 Brassica rapa FPsc
Brara.G02581 10.0kb upstream 10.0kb upstream 10000 false A07: 21335227-21345226 Brassica rapa FPsc
Brara.G02581 10.0kb downstream 10.0kb downstream 15105 true A07: 21345227-21360331 Brassica rapa FPsc
Brara.G02581 10.0kb downstream 10.0kb downstream 10000 false A07: 21350332-21360331 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351576 5261 Brassicaceae Singleton cluster - no MSA
123790445 5264 Brassicales-Malvales Singleton cluster - no MSA
124288401 5266 SBM Singleton cluster - no MSA
124141918 5268 Malvidae Singleton cluster - no MSA
124064379 5270 Rosid View MSA
123737526 5271 Pentapetalae View MSA
122795651 5272 Eudicot View MSA
122049941 5273 Angiosperm View MSA
121311657 5274 Embryophyte View MSA
123348927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier