Gene : Brara.D02005 B. rapa FPsc v1.3
Defline:  (1 of 5) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Genomic Order:  2005
Name:  ? Brara.D02005 Secondary Identifier:  ? PAC:30620440
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6435 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02005 0.5kb upstream 0.5kb upstream 3788 true A04: 16799137-16802924 Brassica rapa FPsc
Brara.D02005 0.5kb upstream 0.5kb upstream 500 false A04: 16802425-16802924 Brassica rapa FPsc
Brara.D02005 0.5kb downstream 0.5kb downstream 3788 true A04: 16798637-16802424 Brassica rapa FPsc
Brara.D02005 0.5kb downstream 0.5kb downstream 500 false A04: 16798637-16799136 Brassica rapa FPsc
Brara.D02005 1.0kb upstream 1.0kb upstream 4288 true A04: 16799137-16803424 Brassica rapa FPsc
Brara.D02005 1.0kb upstream 1.0kb upstream 1000 false A04: 16802425-16803424 Brassica rapa FPsc
Brara.D02005 1.0kb downstream 1.0kb downstream 4288 true A04: 16798137-16802424 Brassica rapa FPsc
Brara.D02005 1.0kb downstream 1.0kb downstream 1000 false A04: 16798137-16799136 Brassica rapa FPsc
Brara.D02005 2.0kb upstream 2.0kb upstream 5288 true A04: 16799137-16804424 Brassica rapa FPsc
Brara.D02005 2.0kb upstream 2.0kb upstream 2000 false A04: 16802425-16804424 Brassica rapa FPsc
Brara.D02005 2.0kb downstream 2.0kb downstream 5288 true A04: 16797137-16802424 Brassica rapa FPsc
Brara.D02005 2.0kb downstream 2.0kb downstream 2000 false A04: 16797137-16799136 Brassica rapa FPsc
Brara.D02005 5.0kb upstream 5.0kb upstream 8288 true A04: 16799137-16807424 Brassica rapa FPsc
Brara.D02005 5.0kb upstream 5.0kb upstream 5000 false A04: 16802425-16807424 Brassica rapa FPsc
Brara.D02005 5.0kb downstream 5.0kb downstream 8288 true A04: 16794137-16802424 Brassica rapa FPsc
Brara.D02005 5.0kb downstream 5.0kb downstream 5000 false A04: 16794137-16799136 Brassica rapa FPsc
Brara.D02005 10.0kb upstream 10.0kb upstream 13288 true A04: 16799137-16812424 Brassica rapa FPsc
Brara.D02005 10.0kb upstream 10.0kb upstream 10000 false A04: 16802425-16812424 Brassica rapa FPsc
Brara.D02005 10.0kb downstream 10.0kb downstream 13288 true A04: 16789137-16802424 Brassica rapa FPsc
Brara.D02005 10.0kb downstream 10.0kb downstream 10000 false A04: 16789137-16799136 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348354 5261 Brassicaceae Singleton cluster - no MSA
123842602 5264 Brassicales-Malvales View MSA
124350993 5266 SBM View MSA
124246471 5268 Malvidae View MSA
124070477 5270 Rosid View MSA
123750766 5271 Pentapetalae View MSA
122786071 5272 Eudicot View MSA
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier