Gene : Brara.A03611 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Genomic Order:  3611
Name:  ? Brara.A03611 Secondary Identifier:  ? PAC:30636302
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03611 0.5kb upstream 0.5kb upstream 2410 true A01: 29152605-29155014 Brassica rapa FPsc
Brara.A03611 0.5kb upstream 0.5kb upstream 500 false A01: 29154515-29155014 Brassica rapa FPsc
Brara.A03611 0.5kb downstream 0.5kb downstream 2410 true A01: 29152105-29154514 Brassica rapa FPsc
Brara.A03611 0.5kb downstream 0.5kb downstream 500 false A01: 29152105-29152604 Brassica rapa FPsc
Brara.A03611 1.0kb upstream 1.0kb upstream 2910 true A01: 29152605-29155514 Brassica rapa FPsc
Brara.A03611 1.0kb upstream 1.0kb upstream 1000 false A01: 29154515-29155514 Brassica rapa FPsc
Brara.A03611 1.0kb downstream 1.0kb downstream 2910 true A01: 29151605-29154514 Brassica rapa FPsc
Brara.A03611 1.0kb downstream 1.0kb downstream 1000 false A01: 29151605-29152604 Brassica rapa FPsc
Brara.A03611 2.0kb upstream 2.0kb upstream 3910 true A01: 29152605-29156514 Brassica rapa FPsc
Brara.A03611 2.0kb upstream 2.0kb upstream 2000 false A01: 29154515-29156514 Brassica rapa FPsc
Brara.A03611 2.0kb downstream 2.0kb downstream 3910 true A01: 29150605-29154514 Brassica rapa FPsc
Brara.A03611 2.0kb downstream 2.0kb downstream 2000 false A01: 29150605-29152604 Brassica rapa FPsc
Brara.A03611 5.0kb upstream 5.0kb upstream 6910 true A01: 29152605-29159514 Brassica rapa FPsc
Brara.A03611 5.0kb upstream 5.0kb upstream 5000 false A01: 29154515-29159514 Brassica rapa FPsc
Brara.A03611 5.0kb downstream 5.0kb downstream 6910 true A01: 29147605-29154514 Brassica rapa FPsc
Brara.A03611 5.0kb downstream 5.0kb downstream 5000 false A01: 29147605-29152604 Brassica rapa FPsc
Brara.A03611 10.0kb upstream 10.0kb upstream 11910 true A01: 29152605-29164514 Brassica rapa FPsc
Brara.A03611 10.0kb upstream 10.0kb upstream 10000 false A01: 29154515-29164514 Brassica rapa FPsc
Brara.A03611 10.0kb downstream 10.0kb downstream 11910 true A01: 29142605-29154514 Brassica rapa FPsc
Brara.A03611 10.0kb downstream 10.0kb downstream 10000 false A01: 29142605-29152604 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122352150 5261 Brassicaceae Singleton cluster - no MSA
123790927 5264 Brassicales-Malvales Singleton cluster - no MSA
124288857 5266 SBM Singleton cluster - no MSA
124255797 5268 Malvidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier