Gene : Brara.H01037 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31747:SF3 - PROTEIN LSD1 Genomic Order:  1037
Name:  ? Brara.H01037 Secondary Identifier:  ? PAC:30649391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01037 0.5kb upstream 0.5kb upstream 1908 true A08: 12246505-12248412 Brassica rapa FPsc
Brara.H01037 0.5kb upstream 0.5kb upstream 500 false A08: 12246505-12247004 Brassica rapa FPsc
Brara.H01037 0.5kb downstream 0.5kb downstream 1908 true A08: 12247005-12248912 Brassica rapa FPsc
Brara.H01037 0.5kb downstream 0.5kb downstream 500 false A08: 12248413-12248912 Brassica rapa FPsc
Brara.H01037 1.0kb upstream 1.0kb upstream 2408 true A08: 12246005-12248412 Brassica rapa FPsc
Brara.H01037 1.0kb upstream 1.0kb upstream 1000 false A08: 12246005-12247004 Brassica rapa FPsc
Brara.H01037 1.0kb downstream 1.0kb downstream 2408 true A08: 12247005-12249412 Brassica rapa FPsc
Brara.H01037 1.0kb downstream 1.0kb downstream 1000 false A08: 12248413-12249412 Brassica rapa FPsc
Brara.H01037 2.0kb upstream 2.0kb upstream 3408 true A08: 12245005-12248412 Brassica rapa FPsc
Brara.H01037 2.0kb upstream 2.0kb upstream 2000 false A08: 12245005-12247004 Brassica rapa FPsc
Brara.H01037 2.0kb downstream 2.0kb downstream 3408 true A08: 12247005-12250412 Brassica rapa FPsc
Brara.H01037 2.0kb downstream 2.0kb downstream 2000 false A08: 12248413-12250412 Brassica rapa FPsc
Brara.H01037 5.0kb upstream 5.0kb upstream 6408 true A08: 12242005-12248412 Brassica rapa FPsc
Brara.H01037 5.0kb upstream 5.0kb upstream 5000 false A08: 12242005-12247004 Brassica rapa FPsc
Brara.H01037 5.0kb downstream 5.0kb downstream 6408 true A08: 12247005-12253412 Brassica rapa FPsc
Brara.H01037 5.0kb downstream 5.0kb downstream 5000 false A08: 12248413-12253412 Brassica rapa FPsc
Brara.H01037 10.0kb upstream 10.0kb upstream 11408 true A08: 12237005-12248412 Brassica rapa FPsc
Brara.H01037 10.0kb upstream 10.0kb upstream 10000 false A08: 12237005-12247004 Brassica rapa FPsc
Brara.H01037 10.0kb downstream 10.0kb downstream 11408 true A08: 12247005-12258412 Brassica rapa FPsc
Brara.H01037 10.0kb downstream 10.0kb downstream 10000 false A08: 12248413-12258412 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355506 5261 Brassicaceae Singleton cluster - no MSA
123793742 5264 Brassicales-Malvales Singleton cluster - no MSA
124291571 5266 SBM Singleton cluster - no MSA
124253949 5268 Malvidae View MSA
124064125 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier