Gene : Brara.B00112 B. rapa FPsc v1.3
Defline:  (1 of 52) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  112
Name:  ? Brara.B00112 Secondary Identifier:  ? PAC:30610858
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00112 0.5kb upstream 0.5kb upstream 3371 true A02: 589253-592623 Brassica rapa FPsc
Brara.B00112 0.5kb upstream 0.5kb upstream 500 false A02: 592124-592623 Brassica rapa FPsc
Brara.B00112 0.5kb downstream 0.5kb downstream 3371 true A02: 588753-592123 Brassica rapa FPsc
Brara.B00112 0.5kb downstream 0.5kb downstream 500 false A02: 588753-589252 Brassica rapa FPsc
Brara.B00112 1.0kb upstream 1.0kb upstream 3871 true A02: 589253-593123 Brassica rapa FPsc
Brara.B00112 1.0kb upstream 1.0kb upstream 1000 false A02: 592124-593123 Brassica rapa FPsc
Brara.B00112 1.0kb downstream 1.0kb downstream 3871 true A02: 588253-592123 Brassica rapa FPsc
Brara.B00112 1.0kb downstream 1.0kb downstream 1000 false A02: 588253-589252 Brassica rapa FPsc
Brara.B00112 2.0kb upstream 2.0kb upstream 4871 true A02: 589253-594123 Brassica rapa FPsc
Brara.B00112 2.0kb upstream 2.0kb upstream 2000 false A02: 592124-594123 Brassica rapa FPsc
Brara.B00112 2.0kb downstream 2.0kb downstream 4871 true A02: 587253-592123 Brassica rapa FPsc
Brara.B00112 2.0kb downstream 2.0kb downstream 2000 false A02: 587253-589252 Brassica rapa FPsc
Brara.B00112 5.0kb upstream 5.0kb upstream 7871 true A02: 589253-597123 Brassica rapa FPsc
Brara.B00112 5.0kb upstream 5.0kb upstream 5000 false A02: 592124-597123 Brassica rapa FPsc
Brara.B00112 5.0kb downstream 5.0kb downstream 7871 true A02: 584253-592123 Brassica rapa FPsc
Brara.B00112 5.0kb downstream 5.0kb downstream 5000 false A02: 584253-589252 Brassica rapa FPsc
Brara.B00112 10.0kb upstream 10.0kb upstream 12871 true A02: 589253-602123 Brassica rapa FPsc
Brara.B00112 10.0kb upstream 10.0kb upstream 10000 false A02: 592124-602123 Brassica rapa FPsc
Brara.B00112 10.0kb downstream 10.0kb downstream 12871 true A02: 579253-592123 Brassica rapa FPsc
Brara.B00112 10.0kb downstream 10.0kb downstream 10000 false A02: 579253-589252 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026515 5273 Angiosperm View MSA
122364709 5261 Brassicaceae View MSA
123829548 5264 Brassicales-Malvales View MSA
124339928 5266 SBM View MSA
124240821 5268 Malvidae View MSA
124069148 5270 Rosid View MSA
123736383 5271 Pentapetalae View MSA
122786219 5272 Eudicot View MSA
121296364 5274 Embryophyte View MSA
123334542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier