Gene : Brara.H00070 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  70
Name:  ? Brara.H00070 Secondary Identifier:  ? PAC:30648802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00070 0.5kb upstream 0.5kb upstream 5710 true A08: 564491-570200 Brassica rapa FPsc
Brara.H00070 0.5kb upstream 0.5kb upstream 500 false A08: 569701-570200 Brassica rapa FPsc
Brara.H00070 0.5kb downstream 0.5kb downstream 5710 true A08: 563991-569700 Brassica rapa FPsc
Brara.H00070 0.5kb downstream 0.5kb downstream 500 false A08: 563991-564490 Brassica rapa FPsc
Brara.H00070 1.0kb upstream 1.0kb upstream 6210 true A08: 564491-570700 Brassica rapa FPsc
Brara.H00070 1.0kb upstream 1.0kb upstream 1000 false A08: 569701-570700 Brassica rapa FPsc
Brara.H00070 1.0kb downstream 1.0kb downstream 6210 true A08: 563491-569700 Brassica rapa FPsc
Brara.H00070 1.0kb downstream 1.0kb downstream 1000 false A08: 563491-564490 Brassica rapa FPsc
Brara.H00070 2.0kb upstream 2.0kb upstream 7210 true A08: 564491-571700 Brassica rapa FPsc
Brara.H00070 2.0kb upstream 2.0kb upstream 2000 false A08: 569701-571700 Brassica rapa FPsc
Brara.H00070 2.0kb downstream 2.0kb downstream 7210 true A08: 562491-569700 Brassica rapa FPsc
Brara.H00070 2.0kb downstream 2.0kb downstream 2000 false A08: 562491-564490 Brassica rapa FPsc
Brara.H00070 5.0kb upstream 5.0kb upstream 10210 true A08: 564491-574700 Brassica rapa FPsc
Brara.H00070 5.0kb upstream 5.0kb upstream 5000 false A08: 569701-574700 Brassica rapa FPsc
Brara.H00070 5.0kb downstream 5.0kb downstream 10210 true A08: 559491-569700 Brassica rapa FPsc
Brara.H00070 5.0kb downstream 5.0kb downstream 5000 false A08: 559491-564490 Brassica rapa FPsc
Brara.H00070 10.0kb upstream 10.0kb upstream 15210 true A08: 564491-579700 Brassica rapa FPsc
Brara.H00070 10.0kb upstream 10.0kb upstream 10000 false A08: 569701-579700 Brassica rapa FPsc
Brara.H00070 10.0kb downstream 10.0kb downstream 15210 true A08: 554491-569700 Brassica rapa FPsc
Brara.H00070 10.0kb downstream 10.0kb downstream 10000 false A08: 554491-564490 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366402 5261 Brassicaceae View MSA
123830825 5264 Brassicales-Malvales View MSA
124341385 5266 SBM View MSA
124238716 5268 Malvidae View MSA
124068574 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier