Gene : Brara.B00191 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.5.1.46 - Deoxyhypusine synthase / Spermidine dehydrogenase Genomic Order:  191
Name:  ? Brara.B00191 Secondary Identifier:  ? PAC:30610126
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5905 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00191 0.5kb upstream 0.5kb upstream 2596 true A02: 907070-909665 Brassica rapa FPsc
Brara.B00191 0.5kb upstream 0.5kb upstream 500 false A02: 909166-909665 Brassica rapa FPsc
Brara.B00191 0.5kb downstream 0.5kb downstream 2596 true A02: 906570-909165 Brassica rapa FPsc
Brara.B00191 0.5kb downstream 0.5kb downstream 500 false A02: 906570-907069 Brassica rapa FPsc
Brara.B00191 1.0kb upstream 1.0kb upstream 3096 true A02: 907070-910165 Brassica rapa FPsc
Brara.B00191 1.0kb upstream 1.0kb upstream 1000 false A02: 909166-910165 Brassica rapa FPsc
Brara.B00191 1.0kb downstream 1.0kb downstream 3096 true A02: 906070-909165 Brassica rapa FPsc
Brara.B00191 1.0kb downstream 1.0kb downstream 1000 false A02: 906070-907069 Brassica rapa FPsc
Brara.B00191 2.0kb upstream 2.0kb upstream 4096 true A02: 907070-911165 Brassica rapa FPsc
Brara.B00191 2.0kb upstream 2.0kb upstream 2000 false A02: 909166-911165 Brassica rapa FPsc
Brara.B00191 2.0kb downstream 2.0kb downstream 4096 true A02: 905070-909165 Brassica rapa FPsc
Brara.B00191 2.0kb downstream 2.0kb downstream 2000 false A02: 905070-907069 Brassica rapa FPsc
Brara.B00191 5.0kb upstream 5.0kb upstream 7096 true A02: 907070-914165 Brassica rapa FPsc
Brara.B00191 5.0kb upstream 5.0kb upstream 5000 false A02: 909166-914165 Brassica rapa FPsc
Brara.B00191 5.0kb downstream 5.0kb downstream 7096 true A02: 902070-909165 Brassica rapa FPsc
Brara.B00191 5.0kb downstream 5.0kb downstream 5000 false A02: 902070-907069 Brassica rapa FPsc
Brara.B00191 10.0kb upstream 10.0kb upstream 12096 true A02: 907070-919165 Brassica rapa FPsc
Brara.B00191 10.0kb upstream 10.0kb upstream 10000 false A02: 909166-919165 Brassica rapa FPsc
Brara.B00191 10.0kb downstream 10.0kb downstream 12096 true A02: 897070-909165 Brassica rapa FPsc
Brara.B00191 10.0kb downstream 10.0kb downstream 10000 false A02: 897070-907069 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345522 5261 Brassicaceae Singleton cluster - no MSA
123785361 5264 Brassicales-Malvales Singleton cluster - no MSA
124283506 5266 SBM Singleton cluster - no MSA
124137897 5268 Malvidae Singleton cluster - no MSA
123865537 5270 Rosid Singleton cluster - no MSA
123736781 5271 Pentapetalae View MSA
122791984 5272 Eudicot View MSA
122048082 5273 Angiosperm View MSA
121345605 5274 Embryophyte View MSA
123427897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier