Gene : Brara.G03536 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31384:SF19 - AUXIN RESPONSE FACTOR 17 Genomic Order:  3536
Name:  ? Brara.G03536 Secondary Identifier:  ? PAC:30634141
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03536 0.5kb upstream 0.5kb upstream 3675 true A07: 26411430-26415104 Brassica rapa FPsc
Brara.G03536 0.5kb upstream 0.5kb upstream 500 false A07: 26411430-26411929 Brassica rapa FPsc
Brara.G03536 0.5kb downstream 0.5kb downstream 3675 true A07: 26411930-26415604 Brassica rapa FPsc
Brara.G03536 0.5kb downstream 0.5kb downstream 500 false A07: 26415105-26415604 Brassica rapa FPsc
Brara.G03536 1.0kb upstream 1.0kb upstream 4175 true A07: 26410930-26415104 Brassica rapa FPsc
Brara.G03536 1.0kb upstream 1.0kb upstream 1000 false A07: 26410930-26411929 Brassica rapa FPsc
Brara.G03536 1.0kb downstream 1.0kb downstream 4175 true A07: 26411930-26416104 Brassica rapa FPsc
Brara.G03536 1.0kb downstream 1.0kb downstream 1000 false A07: 26415105-26416104 Brassica rapa FPsc
Brara.G03536 2.0kb upstream 2.0kb upstream 5175 true A07: 26409930-26415104 Brassica rapa FPsc
Brara.G03536 2.0kb upstream 2.0kb upstream 2000 false A07: 26409930-26411929 Brassica rapa FPsc
Brara.G03536 2.0kb downstream 2.0kb downstream 5175 true A07: 26411930-26417104 Brassica rapa FPsc
Brara.G03536 2.0kb downstream 2.0kb downstream 2000 false A07: 26415105-26417104 Brassica rapa FPsc
Brara.G03536 5.0kb upstream 5.0kb upstream 8175 true A07: 26406930-26415104 Brassica rapa FPsc
Brara.G03536 5.0kb upstream 5.0kb upstream 5000 false A07: 26406930-26411929 Brassica rapa FPsc
Brara.G03536 5.0kb downstream 5.0kb downstream 8175 true A07: 26411930-26420104 Brassica rapa FPsc
Brara.G03536 5.0kb downstream 5.0kb downstream 5000 false A07: 26415105-26420104 Brassica rapa FPsc
Brara.G03536 10.0kb upstream 10.0kb upstream 13175 true A07: 26401930-26415104 Brassica rapa FPsc
Brara.G03536 10.0kb upstream 10.0kb upstream 10000 false A07: 26401930-26411929 Brassica rapa FPsc
Brara.G03536 10.0kb downstream 10.0kb downstream 13175 true A07: 26411930-26425104 Brassica rapa FPsc
Brara.G03536 10.0kb downstream 10.0kb downstream 10000 false A07: 26415105-26425104 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351592 5261 Brassicaceae Singleton cluster - no MSA
123790460 5264 Brassicales-Malvales Singleton cluster - no MSA
124288414 5266 SBM Singleton cluster - no MSA
124141928 5268 Malvidae Singleton cluster - no MSA
124065816 5270 Rosid View MSA
123744136 5271 Pentapetalae View MSA
122770913 5272 Eudicot View MSA
122051947 5273 Angiosperm View MSA
121312823 5274 Embryophyte View MSA
123349961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier