Gene : Brara.G03590 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.5.1.30 - Heptaprenyl diphosphate synthase / Trans-hexaprenyltranstransferase Genomic Order:  3590
Name:  ? Brara.G03590 Secondary Identifier:  ? PAC:30631982
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HEXPPSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5120 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5783 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5805 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5807 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5864 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5910 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6520 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03590 0.5kb upstream 0.5kb upstream 3125 true A07: 26741172-26744296 Brassica rapa FPsc
Brara.G03590 0.5kb upstream 0.5kb upstream 500 false A07: 26743797-26744296 Brassica rapa FPsc
Brara.G03590 0.5kb downstream 0.5kb downstream 3125 true A07: 26740672-26743796 Brassica rapa FPsc
Brara.G03590 0.5kb downstream 0.5kb downstream 500 false A07: 26740672-26741171 Brassica rapa FPsc
Brara.G03590 1.0kb upstream 1.0kb upstream 3625 true A07: 26741172-26744796 Brassica rapa FPsc
Brara.G03590 1.0kb upstream 1.0kb upstream 1000 false A07: 26743797-26744796 Brassica rapa FPsc
Brara.G03590 1.0kb downstream 1.0kb downstream 3625 true A07: 26740172-26743796 Brassica rapa FPsc
Brara.G03590 1.0kb downstream 1.0kb downstream 1000 false A07: 26740172-26741171 Brassica rapa FPsc
Brara.G03590 2.0kb upstream 2.0kb upstream 4625 true A07: 26741172-26745796 Brassica rapa FPsc
Brara.G03590 2.0kb upstream 2.0kb upstream 2000 false A07: 26743797-26745796 Brassica rapa FPsc
Brara.G03590 2.0kb downstream 2.0kb downstream 4625 true A07: 26739172-26743796 Brassica rapa FPsc
Brara.G03590 2.0kb downstream 2.0kb downstream 2000 false A07: 26739172-26741171 Brassica rapa FPsc
Brara.G03590 5.0kb upstream 5.0kb upstream 7625 true A07: 26741172-26748796 Brassica rapa FPsc
Brara.G03590 5.0kb upstream 5.0kb upstream 5000 false A07: 26743797-26748796 Brassica rapa FPsc
Brara.G03590 5.0kb downstream 5.0kb downstream 7625 true A07: 26736172-26743796 Brassica rapa FPsc
Brara.G03590 5.0kb downstream 5.0kb downstream 5000 false A07: 26736172-26741171 Brassica rapa FPsc
Brara.G03590 10.0kb upstream 10.0kb upstream 12625 true A07: 26741172-26753796 Brassica rapa FPsc
Brara.G03590 10.0kb upstream 10.0kb upstream 10000 false A07: 26743797-26753796 Brassica rapa FPsc
Brara.G03590 10.0kb downstream 10.0kb downstream 12625 true A07: 26731172-26743796 Brassica rapa FPsc
Brara.G03590 10.0kb downstream 10.0kb downstream 10000 false A07: 26731172-26741171 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
122373293 5261 Brassicaceae View MSA
123836843 5264 Brassicales-Malvales View MSA
124340662 5266 SBM View MSA
124241252 5268 Malvidae View MSA
124065347 5270 Rosid View MSA
123746184 5271 Pentapetalae View MSA
122791358 5272 Eudicot View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier