Gene : Brara.G03472 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 Genomic Order:  3472
Name:  ? Brara.G03472 Secondary Identifier:  ? PAC:30634717
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03472 0.5kb upstream 0.5kb upstream 1607 true A07: 26065410-26067016 Brassica rapa FPsc
Brara.G03472 0.5kb upstream 0.5kb upstream 500 false A07: 26066517-26067016 Brassica rapa FPsc
Brara.G03472 0.5kb downstream 0.5kb downstream 1607 true A07: 26064910-26066516 Brassica rapa FPsc
Brara.G03472 0.5kb downstream 0.5kb downstream 500 false A07: 26064910-26065409 Brassica rapa FPsc
Brara.G03472 1.0kb upstream 1.0kb upstream 2107 true A07: 26065410-26067516 Brassica rapa FPsc
Brara.G03472 1.0kb upstream 1.0kb upstream 1000 false A07: 26066517-26067516 Brassica rapa FPsc
Brara.G03472 1.0kb downstream 1.0kb downstream 2107 true A07: 26064410-26066516 Brassica rapa FPsc
Brara.G03472 1.0kb downstream 1.0kb downstream 1000 false A07: 26064410-26065409 Brassica rapa FPsc
Brara.G03472 2.0kb upstream 2.0kb upstream 3107 true A07: 26065410-26068516 Brassica rapa FPsc
Brara.G03472 2.0kb upstream 2.0kb upstream 2000 false A07: 26066517-26068516 Brassica rapa FPsc
Brara.G03472 2.0kb downstream 2.0kb downstream 3107 true A07: 26063410-26066516 Brassica rapa FPsc
Brara.G03472 2.0kb downstream 2.0kb downstream 2000 false A07: 26063410-26065409 Brassica rapa FPsc
Brara.G03472 5.0kb upstream 5.0kb upstream 6107 true A07: 26065410-26071516 Brassica rapa FPsc
Brara.G03472 5.0kb upstream 5.0kb upstream 5000 false A07: 26066517-26071516 Brassica rapa FPsc
Brara.G03472 5.0kb downstream 5.0kb downstream 6107 true A07: 26060410-26066516 Brassica rapa FPsc
Brara.G03472 5.0kb downstream 5.0kb downstream 5000 false A07: 26060410-26065409 Brassica rapa FPsc
Brara.G03472 10.0kb upstream 10.0kb upstream 11107 true A07: 26065410-26076516 Brassica rapa FPsc
Brara.G03472 10.0kb upstream 10.0kb upstream 10000 false A07: 26066517-26076516 Brassica rapa FPsc
Brara.G03472 10.0kb downstream 10.0kb downstream 11107 true A07: 26055410-26066516 Brassica rapa FPsc
Brara.G03472 10.0kb downstream 10.0kb downstream 10000 false A07: 26055410-26065409 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351742 5261 Brassicaceae Singleton cluster - no MSA
123790583 5264 Brassicales-Malvales Singleton cluster - no MSA
124288528 5266 SBM Singleton cluster - no MSA
124142025 5268 Malvidae Singleton cluster - no MSA
124074567 5270 Rosid View MSA
123743575 5271 Pentapetalae View MSA
122788488 5272 Eudicot View MSA
122047292 5273 Angiosperm View MSA
121345719 5274 Embryophyte View MSA
123424413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier