Protein Family : LSM domain containing protein, expressed 123424413

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  110

110 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
107803 (1 of 1) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 S. moellendorffii v1.0 440   scaffold_35: 1237642-1238081
29576.t000005 (1 of 1) K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) R. communis v0.1 1483   29576: 41961-43443
Cucsa.363670 (1 of 1) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 C. sativus v1.0 2004   scaffold03611: 1266777-1268780
orange1.1g034340m.g (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 C. sinensis v1.1 1888   scaffold08292: 436-2323
orange1.1g034343m.g (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 C. sinensis v1.1 1819   scaffold00002: 647176-648994
AT1G21190 (1 of 2) K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) A. thaliana TAIR10 1226   Chr1: 7419678-7420903
AT1G76860 (1 of 2) K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) A. thaliana TAIR10 1337   Chr1: 28854414-28855750
Thhalv10019321m.g (1 of 1) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 E. salsugineum v1.0 1967   scaffold_9: 1665738-1667704
Ciclev10002950m.g (1 of 1) KOG3460 - Small nuclear ribonucleoprotein (snRNP) LSM3 C. clementina v1.0 2073   scaffold_5: 38639091-38641163
Lus10042341.g (1 of 1) PTHR13110//PTHR13110:SF2 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 L. usitatissimum v1.0 1335   scaffold123: 1751926-1753260
Lus10040487.g (1 of 4) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 L. usitatissimum v1.0 1115   scaffold86: 2146519-2147633
Lus10026326.g (1 of 4) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 L. usitatissimum v1.0 1255   scaffold898: 639854-641108
Lus10011293.g (1 of 4) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 L. usitatissimum v1.0 1112   scaffold1037: 264784-265895
Gorai.002G055500 (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 G. raimondii v2.1 2761   Chr02: 5026333-5029093
Gorai.009G253600 (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 G. raimondii v2.1 2025   Chr09: 20798054-20800078
e_gw1.3.550.1 (1 of 1) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 C. subellipsoidea C-169 v2.0 564   scaffold_3: 2370075-2370638
estExt_Genewise1.C_15_t10255 (1 of 1) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 M. pusilla CCMP1545 v3.0 764   scaffold_15: 302438-303201
estExt_Genewise2Plus.C_Chr_130290 (1 of 1) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 M. sp RCC299 v3.0 648   Chr_13: 554846-555493
e_gwEuk.20.472.1 (1 of 1) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 O. lucimarinus v2.0 392   Chr_20: 63397-63788
Thecc1EG035558 (1 of 1) K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) T. cacao v1.1 2411   scaffold_8: 10109409-10111819
Migut.N03226 (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 M. guttatus v2.0 2240   scaffold_14: 25487425-25489664
Migut.C01015 (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 M. guttatus v2.0 1658   scaffold_3: 16922038-16923695
Araha.11451s0006 (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 A. halleri v1.1 1569   Scaffold11451: 30135-31703
Araha.13267s0005 (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 A. halleri v1.1 1127   Scaffold13267: 17975-19101
Cagra.1632s0014 (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 C. grandiflora v1.1 1118   Scaffold1632: 57784-58901
Cagra.2281s0001 (1 of 2) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 C. grandiflora v1.1 1205   Scaffold2281: 4742-5946
Glyma.16G167900 (1 of 3) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 G. max Wm82.a2.v1 3099   Chr16: 32780725-32783823
Glyma.02G082300 (1 of 3) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 G. max Wm82.a2.v1 4758   Chr02: 7153209-7157966
Brara.F01516 (1 of 4) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 B. rapa FPsc v1.3 960   A06: 8917786-8918745
Brara.G02170 (1 of 4) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 B. rapa FPsc v1.3 1548   A07: 19015828-19017375

110 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
107803 S. moellendorffii v1.0 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
29576.m000227 R. communis v0.1 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
Cucsa.363670.1 C. sativus v1.0 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
orange1.1g034343m C. sinensis v1.1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
orange1.1g034340m C. sinensis v1.1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
AT1G76860.1 A. thaliana TAIR10 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
AT1G21190.1 A. thaliana TAIR10 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Thhalv10019321m E. salsugineum v1.0 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
Ciclev10002950m C. clementina v1.0 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
Lus10011293 L. usitatissimum v1.0 123424413 LSM domain containing protein, expressed 4 5275 Viridiplantae
Lus10026326 L. usitatissimum v1.0 123424413 LSM domain containing protein, expressed 4 5275 Viridiplantae
Lus10040487 L. usitatissimum v1.0 123424413 LSM domain containing protein, expressed 4 5275 Viridiplantae
Lus10042341 L. usitatissimum v1.0 123424413 LSM domain containing protein, expressed 4 5275 Viridiplantae
Gorai.009G253600.1 G. raimondii v2.1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Gorai.002G055500.1 G. raimondii v2.1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
12908 C. subellipsoidea C-169 v2.0 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
173650 M. pusilla CCMP1545 v3.0 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
95751 M. sp RCC299 v3.0 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
43771 O. lucimarinus v2.0 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
Thecc1EG035558t1 T. cacao v1.1 123424413 LSM domain containing protein, expressed 1 5275 Viridiplantae
Migut.C01015.1.p M. guttatus v2.0 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Migut.N03226.1.p M. guttatus v2.0 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Araha.13267s0005.1.p A. halleri v1.1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Araha.11451s0006.1.p A. halleri v1.1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Cagra.1632s0014.1.p C. grandiflora v1.1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Cagra.2281s0001.1.p C. grandiflora v1.1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Glyma.02G082300.1.p G. max Wm82.a2.v1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Glyma.16G167900.1.p G. max Wm82.a2.v1 123424413 LSM domain containing protein, expressed 2 5275 Viridiplantae
Brara.G03472.1.p B. rapa FPsc v1.3 123424413 LSM domain containing protein, expressed 3 5275 Viridiplantae
Brara.F01516.1.p B. rapa FPsc v1.3 123424413 LSM domain containing protein, expressed 3 5275 Viridiplantae