Gene : Brara.H01259 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11002//PTHR11002:SF12 - CARBONIC ANHYDRASE Genomic Order:  1259
Name:  ? Brara.H01259 Secondary Identifier:  ? PAC:30649176
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYANCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-241 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  
BrapaFPsc PWYQT-4429 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01259 0.5kb upstream 0.5kb upstream 2886 true A08: 13888611-13891496 Brassica rapa FPsc
Brara.H01259 0.5kb upstream 0.5kb upstream 500 false A08: 13890997-13891496 Brassica rapa FPsc
Brara.H01259 0.5kb downstream 0.5kb downstream 2886 true A08: 13888111-13890996 Brassica rapa FPsc
Brara.H01259 0.5kb downstream 0.5kb downstream 500 false A08: 13888111-13888610 Brassica rapa FPsc
Brara.H01259 1.0kb upstream 1.0kb upstream 3386 true A08: 13888611-13891996 Brassica rapa FPsc
Brara.H01259 1.0kb upstream 1.0kb upstream 1000 false A08: 13890997-13891996 Brassica rapa FPsc
Brara.H01259 1.0kb downstream 1.0kb downstream 3386 true A08: 13887611-13890996 Brassica rapa FPsc
Brara.H01259 1.0kb downstream 1.0kb downstream 1000 false A08: 13887611-13888610 Brassica rapa FPsc
Brara.H01259 2.0kb upstream 2.0kb upstream 4386 true A08: 13888611-13892996 Brassica rapa FPsc
Brara.H01259 2.0kb upstream 2.0kb upstream 2000 false A08: 13890997-13892996 Brassica rapa FPsc
Brara.H01259 2.0kb downstream 2.0kb downstream 4386 true A08: 13886611-13890996 Brassica rapa FPsc
Brara.H01259 2.0kb downstream 2.0kb downstream 2000 false A08: 13886611-13888610 Brassica rapa FPsc
Brara.H01259 5.0kb upstream 5.0kb upstream 7386 true A08: 13888611-13895996 Brassica rapa FPsc
Brara.H01259 5.0kb upstream 5.0kb upstream 5000 false A08: 13890997-13895996 Brassica rapa FPsc
Brara.H01259 5.0kb downstream 5.0kb downstream 7386 true A08: 13883611-13890996 Brassica rapa FPsc
Brara.H01259 5.0kb downstream 5.0kb downstream 5000 false A08: 13883611-13888610 Brassica rapa FPsc
Brara.H01259 10.0kb upstream 10.0kb upstream 12386 true A08: 13888611-13900996 Brassica rapa FPsc
Brara.H01259 10.0kb upstream 10.0kb upstream 10000 false A08: 13890997-13900996 Brassica rapa FPsc
Brara.H01259 10.0kb downstream 10.0kb downstream 12386 true A08: 13878611-13890996 Brassica rapa FPsc
Brara.H01259 10.0kb downstream 10.0kb downstream 10000 false A08: 13878611-13888610 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374795 5261 Brassicaceae View MSA
123839553 5264 Brassicales-Malvales View MSA
124340890 5266 SBM View MSA
124250883 5268 Malvidae View MSA
124068244 5270 Rosid View MSA
123749741 5271 Pentapetalae View MSA
122787175 5272 Eudicot View MSA
122042503 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier