Gene : Brara.H01080 B. rapa FPsc v1.3

Defline:  (1 of 4) PTHR23241:SF65 - LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN-RELATED Genomic Order:  1080
Name:  ? Brara.H01080 Secondary Identifier:  ? PAC:30647974

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01080 0.5kb upstream 0.5kb upstream 1652 true A08: 12589001-12590652 Brassica rapa FPsc
Brara.H01080 0.5kb upstream 0.5kb upstream 500 false A08: 12590153-12590652 Brassica rapa FPsc
Brara.H01080 0.5kb downstream 0.5kb downstream 1652 true A08: 12588501-12590152 Brassica rapa FPsc
Brara.H01080 0.5kb downstream 0.5kb downstream 500 false A08: 12588501-12589000 Brassica rapa FPsc
Brara.H01080 1.0kb upstream 1.0kb upstream 2152 true A08: 12589001-12591152 Brassica rapa FPsc
Brara.H01080 1.0kb upstream 1.0kb upstream 1000 false A08: 12590153-12591152 Brassica rapa FPsc
Brara.H01080 1.0kb downstream 1.0kb downstream 2152 true A08: 12588001-12590152 Brassica rapa FPsc
Brara.H01080 1.0kb downstream 1.0kb downstream 1000 false A08: 12588001-12589000 Brassica rapa FPsc
Brara.H01080 2.0kb upstream 2.0kb upstream 3152 true A08: 12589001-12592152 Brassica rapa FPsc
Brara.H01080 2.0kb upstream 2.0kb upstream 2000 false A08: 12590153-12592152 Brassica rapa FPsc
Brara.H01080 2.0kb downstream 2.0kb downstream 3152 true A08: 12587001-12590152 Brassica rapa FPsc
Brara.H01080 2.0kb downstream 2.0kb downstream 2000 false A08: 12587001-12589000 Brassica rapa FPsc
Brara.H01080 5.0kb upstream 5.0kb upstream 6152 true A08: 12589001-12595152 Brassica rapa FPsc
Brara.H01080 5.0kb upstream 5.0kb upstream 5000 false A08: 12590153-12595152 Brassica rapa FPsc
Brara.H01080 5.0kb downstream 5.0kb downstream 6152 true A08: 12584001-12590152 Brassica rapa FPsc
Brara.H01080 5.0kb downstream 5.0kb downstream 5000 false A08: 12584001-12589000 Brassica rapa FPsc
Brara.H01080 10.0kb upstream 10.0kb upstream 11152 true A08: 12589001-12600152 Brassica rapa FPsc
Brara.H01080 10.0kb upstream 10.0kb upstream 10000 false A08: 12590153-12600152 Brassica rapa FPsc
Brara.H01080 10.0kb downstream 10.0kb downstream 11152 true A08: 12579001-12590152 Brassica rapa FPsc
Brara.H01080 10.0kb downstream 10.0kb downstream 10000 false A08: 12579001-12589000 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373750 5261 Brassicaceae View MSA
123841274 5264 Brassicales-Malvales View MSA
124341278 5266 SBM View MSA
124250059 5268 Malvidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier