Gene : Brara.H00853 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  853
Name:  ? Brara.H00853 Secondary Identifier:  ? PAC:30648294
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6441 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00853 0.5kb upstream 0.5kb upstream 8085 true A08: 10626891-10634975 Brassica rapa FPsc
Brara.H00853 0.5kb upstream 0.5kb upstream 500 false A08: 10626891-10627390 Brassica rapa FPsc
Brara.H00853 0.5kb downstream 0.5kb downstream 8085 true A08: 10627391-10635475 Brassica rapa FPsc
Brara.H00853 0.5kb downstream 0.5kb downstream 500 false A08: 10634976-10635475 Brassica rapa FPsc
Brara.H00853 1.0kb upstream 1.0kb upstream 8585 true A08: 10626391-10634975 Brassica rapa FPsc
Brara.H00853 1.0kb upstream 1.0kb upstream 1000 false A08: 10626391-10627390 Brassica rapa FPsc
Brara.H00853 1.0kb downstream 1.0kb downstream 8585 true A08: 10627391-10635975 Brassica rapa FPsc
Brara.H00853 1.0kb downstream 1.0kb downstream 1000 false A08: 10634976-10635975 Brassica rapa FPsc
Brara.H00853 2.0kb upstream 2.0kb upstream 9585 true A08: 10625391-10634975 Brassica rapa FPsc
Brara.H00853 2.0kb upstream 2.0kb upstream 2000 false A08: 10625391-10627390 Brassica rapa FPsc
Brara.H00853 2.0kb downstream 2.0kb downstream 9585 true A08: 10627391-10636975 Brassica rapa FPsc
Brara.H00853 2.0kb downstream 2.0kb downstream 2000 false A08: 10634976-10636975 Brassica rapa FPsc
Brara.H00853 5.0kb upstream 5.0kb upstream 12585 true A08: 10622391-10634975 Brassica rapa FPsc
Brara.H00853 5.0kb upstream 5.0kb upstream 5000 false A08: 10622391-10627390 Brassica rapa FPsc
Brara.H00853 5.0kb downstream 5.0kb downstream 12585 true A08: 10627391-10639975 Brassica rapa FPsc
Brara.H00853 5.0kb downstream 5.0kb downstream 5000 false A08: 10634976-10639975 Brassica rapa FPsc
Brara.H00853 10.0kb upstream 10.0kb upstream 17585 true A08: 10617391-10634975 Brassica rapa FPsc
Brara.H00853 10.0kb upstream 10.0kb upstream 10000 false A08: 10617391-10627390 Brassica rapa FPsc
Brara.H00853 10.0kb downstream 10.0kb downstream 17585 true A08: 10627391-10644975 Brassica rapa FPsc
Brara.H00853 10.0kb downstream 10.0kb downstream 10000 false A08: 10634976-10644975 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369100 5261 Brassicaceae View MSA
123827782 5264 Brassicales-Malvales View MSA
124338849 5266 SBM View MSA
124238946 5268 Malvidae View MSA
124062670 5270 Rosid View MSA
123738203 5271 Pentapetalae View MSA
122790962 5272 Eudicot View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier