Gene : Brara.B00703 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13040 - AUTOPHAGY PROTEIN 5 Genomic Order:  703
Name:  ? Brara.B00703 Secondary Identifier:  ? PAC:30607893
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00703 0.5kb upstream 0.5kb upstream 2884 true A02: 3254596-3257479 Brassica rapa FPsc
Brara.B00703 0.5kb upstream 0.5kb upstream 500 false A02: 3256980-3257479 Brassica rapa FPsc
Brara.B00703 0.5kb downstream 0.5kb downstream 2884 true A02: 3254096-3256979 Brassica rapa FPsc
Brara.B00703 0.5kb downstream 0.5kb downstream 500 false A02: 3254096-3254595 Brassica rapa FPsc
Brara.B00703 1.0kb upstream 1.0kb upstream 3384 true A02: 3254596-3257979 Brassica rapa FPsc
Brara.B00703 1.0kb upstream 1.0kb upstream 1000 false A02: 3256980-3257979 Brassica rapa FPsc
Brara.B00703 1.0kb downstream 1.0kb downstream 3384 true A02: 3253596-3256979 Brassica rapa FPsc
Brara.B00703 1.0kb downstream 1.0kb downstream 1000 false A02: 3253596-3254595 Brassica rapa FPsc
Brara.B00703 2.0kb upstream 2.0kb upstream 4384 true A02: 3254596-3258979 Brassica rapa FPsc
Brara.B00703 2.0kb upstream 2.0kb upstream 2000 false A02: 3256980-3258979 Brassica rapa FPsc
Brara.B00703 2.0kb downstream 2.0kb downstream 4384 true A02: 3252596-3256979 Brassica rapa FPsc
Brara.B00703 2.0kb downstream 2.0kb downstream 2000 false A02: 3252596-3254595 Brassica rapa FPsc
Brara.B00703 5.0kb upstream 5.0kb upstream 7384 true A02: 3254596-3261979 Brassica rapa FPsc
Brara.B00703 5.0kb upstream 5.0kb upstream 5000 false A02: 3256980-3261979 Brassica rapa FPsc
Brara.B00703 5.0kb downstream 5.0kb downstream 7384 true A02: 3249596-3256979 Brassica rapa FPsc
Brara.B00703 5.0kb downstream 5.0kb downstream 5000 false A02: 3249596-3254595 Brassica rapa FPsc
Brara.B00703 10.0kb upstream 10.0kb upstream 12384 true A02: 3254596-3266979 Brassica rapa FPsc
Brara.B00703 10.0kb upstream 10.0kb upstream 10000 false A02: 3256980-3266979 Brassica rapa FPsc
Brara.B00703 10.0kb downstream 10.0kb downstream 12384 true A02: 3244596-3256979 Brassica rapa FPsc
Brara.B00703 10.0kb downstream 10.0kb downstream 10000 false A02: 3244596-3254595 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361442 5261 Brassicaceae View MSA
123838673 5264 Brassicales-Malvales View MSA
124346411 5266 SBM View MSA
124243559 5268 Malvidae View MSA
124066677 5270 Rosid View MSA
123746319 5271 Pentapetalae View MSA
122787337 5272 Eudicot View MSA
122043492 5273 Angiosperm View MSA
121349357 5274 Embryophyte View MSA
123424338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier