Gene : Brara.H01856 B. rapa FPsc v1.3
Defline:  (1 of 8) 2.7.8.11 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase Genomic Order:  1856
Name:  ? Brara.H01856 Secondary Identifier:  ? PAC:30647539
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7625 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01856 0.5kb upstream 0.5kb upstream 2344 true A08: 17545682-17548025 Brassica rapa FPsc
Brara.H01856 0.5kb upstream 0.5kb upstream 500 false A08: 17545682-17546181 Brassica rapa FPsc
Brara.H01856 0.5kb downstream 0.5kb downstream 2344 true A08: 17546182-17548525 Brassica rapa FPsc
Brara.H01856 0.5kb downstream 0.5kb downstream 500 false A08: 17548026-17548525 Brassica rapa FPsc
Brara.H01856 1.0kb upstream 1.0kb upstream 2844 true A08: 17545182-17548025 Brassica rapa FPsc
Brara.H01856 1.0kb upstream 1.0kb upstream 1000 false A08: 17545182-17546181 Brassica rapa FPsc
Brara.H01856 1.0kb downstream 1.0kb downstream 2844 true A08: 17546182-17549025 Brassica rapa FPsc
Brara.H01856 1.0kb downstream 1.0kb downstream 1000 false A08: 17548026-17549025 Brassica rapa FPsc
Brara.H01856 2.0kb upstream 2.0kb upstream 3844 true A08: 17544182-17548025 Brassica rapa FPsc
Brara.H01856 2.0kb upstream 2.0kb upstream 2000 false A08: 17544182-17546181 Brassica rapa FPsc
Brara.H01856 2.0kb downstream 2.0kb downstream 3844 true A08: 17546182-17550025 Brassica rapa FPsc
Brara.H01856 2.0kb downstream 2.0kb downstream 2000 false A08: 17548026-17550025 Brassica rapa FPsc
Brara.H01856 5.0kb upstream 5.0kb upstream 6844 true A08: 17541182-17548025 Brassica rapa FPsc
Brara.H01856 5.0kb upstream 5.0kb upstream 5000 false A08: 17541182-17546181 Brassica rapa FPsc
Brara.H01856 5.0kb downstream 5.0kb downstream 6844 true A08: 17546182-17553025 Brassica rapa FPsc
Brara.H01856 5.0kb downstream 5.0kb downstream 5000 false A08: 17548026-17553025 Brassica rapa FPsc
Brara.H01856 10.0kb upstream 10.0kb upstream 11844 true A08: 17536182-17548025 Brassica rapa FPsc
Brara.H01856 10.0kb upstream 10.0kb upstream 10000 false A08: 17536182-17546181 Brassica rapa FPsc
Brara.H01856 10.0kb downstream 10.0kb downstream 11844 true A08: 17546182-17558025 Brassica rapa FPsc
Brara.H01856 10.0kb downstream 10.0kb downstream 10000 false A08: 17548026-17558025 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379142 5261 Brassicaceae View MSA
123837573 5264 Brassicales-Malvales View MSA
124322337 5266 SBM View MSA
124237971 5268 Malvidae View MSA
124074338 5270 Rosid View MSA
123738044 5271 Pentapetalae View MSA
122788491 5272 Eudicot View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier