Gene : Brara.H00670 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR14363:SF16 - HEPARANASE-LIKE PROTEIN 3 Genomic Order:  670
Name:  ? Brara.H00670 Secondary Identifier:  ? PAC:30648736
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7213 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00670 0.5kb upstream 0.5kb upstream 3807 true A08: 8770785-8774591 Brassica rapa FPsc
Brara.H00670 0.5kb upstream 0.5kb upstream 500 false A08: 8770785-8771284 Brassica rapa FPsc
Brara.H00670 0.5kb downstream 0.5kb downstream 3807 true A08: 8771285-8775091 Brassica rapa FPsc
Brara.H00670 0.5kb downstream 0.5kb downstream 500 false A08: 8774592-8775091 Brassica rapa FPsc
Brara.H00670 1.0kb upstream 1.0kb upstream 4307 true A08: 8770285-8774591 Brassica rapa FPsc
Brara.H00670 1.0kb upstream 1.0kb upstream 1000 false A08: 8770285-8771284 Brassica rapa FPsc
Brara.H00670 1.0kb downstream 1.0kb downstream 4307 true A08: 8771285-8775591 Brassica rapa FPsc
Brara.H00670 1.0kb downstream 1.0kb downstream 1000 false A08: 8774592-8775591 Brassica rapa FPsc
Brara.H00670 2.0kb upstream 2.0kb upstream 5307 true A08: 8769285-8774591 Brassica rapa FPsc
Brara.H00670 2.0kb upstream 2.0kb upstream 2000 false A08: 8769285-8771284 Brassica rapa FPsc
Brara.H00670 2.0kb downstream 2.0kb downstream 5307 true A08: 8771285-8776591 Brassica rapa FPsc
Brara.H00670 2.0kb downstream 2.0kb downstream 2000 false A08: 8774592-8776591 Brassica rapa FPsc
Brara.H00670 5.0kb upstream 5.0kb upstream 8307 true A08: 8766285-8774591 Brassica rapa FPsc
Brara.H00670 5.0kb upstream 5.0kb upstream 5000 false A08: 8766285-8771284 Brassica rapa FPsc
Brara.H00670 5.0kb downstream 5.0kb downstream 8307 true A08: 8771285-8779591 Brassica rapa FPsc
Brara.H00670 5.0kb downstream 5.0kb downstream 5000 false A08: 8774592-8779591 Brassica rapa FPsc
Brara.H00670 10.0kb upstream 10.0kb upstream 13307 true A08: 8761285-8774591 Brassica rapa FPsc
Brara.H00670 10.0kb upstream 10.0kb upstream 10000 false A08: 8761285-8771284 Brassica rapa FPsc
Brara.H00670 10.0kb downstream 10.0kb downstream 13307 true A08: 8771285-8784591 Brassica rapa FPsc
Brara.H00670 10.0kb downstream 10.0kb downstream 10000 false A08: 8774592-8784591 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374580 5261 Brassicaceae View MSA
123834676 5264 Brassicales-Malvales View MSA
124339213 5266 SBM View MSA
124244974 5268 Malvidae View MSA
124063624 5270 Rosid View MSA
123745490 5271 Pentapetalae View MSA
122791250 5272 Eudicot View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier