Gene : Brara.H00636 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR16263:SF4 - TETRATRICOPEPTIDE REPEAT PROTEIN 38 Genomic Order:  636
Name:  ? Brara.H00636 Secondary Identifier:  ? PAC:30650168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00636 0.5kb upstream 0.5kb upstream 3249 true A08: 8242529-8245777 Brassica rapa FPsc
Brara.H00636 0.5kb upstream 0.5kb upstream 500 false A08: 8245278-8245777 Brassica rapa FPsc
Brara.H00636 0.5kb downstream 0.5kb downstream 3249 true A08: 8242029-8245277 Brassica rapa FPsc
Brara.H00636 0.5kb downstream 0.5kb downstream 500 false A08: 8242029-8242528 Brassica rapa FPsc
Brara.H00636 1.0kb upstream 1.0kb upstream 3749 true A08: 8242529-8246277 Brassica rapa FPsc
Brara.H00636 1.0kb upstream 1.0kb upstream 1000 false A08: 8245278-8246277 Brassica rapa FPsc
Brara.H00636 1.0kb downstream 1.0kb downstream 3749 true A08: 8241529-8245277 Brassica rapa FPsc
Brara.H00636 1.0kb downstream 1.0kb downstream 1000 false A08: 8241529-8242528 Brassica rapa FPsc
Brara.H00636 2.0kb upstream 2.0kb upstream 4749 true A08: 8242529-8247277 Brassica rapa FPsc
Brara.H00636 2.0kb upstream 2.0kb upstream 2000 false A08: 8245278-8247277 Brassica rapa FPsc
Brara.H00636 2.0kb downstream 2.0kb downstream 4749 true A08: 8240529-8245277 Brassica rapa FPsc
Brara.H00636 2.0kb downstream 2.0kb downstream 2000 false A08: 8240529-8242528 Brassica rapa FPsc
Brara.H00636 5.0kb upstream 5.0kb upstream 7749 true A08: 8242529-8250277 Brassica rapa FPsc
Brara.H00636 5.0kb upstream 5.0kb upstream 5000 false A08: 8245278-8250277 Brassica rapa FPsc
Brara.H00636 5.0kb downstream 5.0kb downstream 7749 true A08: 8237529-8245277 Brassica rapa FPsc
Brara.H00636 5.0kb downstream 5.0kb downstream 5000 false A08: 8237529-8242528 Brassica rapa FPsc
Brara.H00636 10.0kb upstream 10.0kb upstream 12749 true A08: 8242529-8255277 Brassica rapa FPsc
Brara.H00636 10.0kb upstream 10.0kb upstream 10000 false A08: 8245278-8255277 Brassica rapa FPsc
Brara.H00636 10.0kb downstream 10.0kb downstream 12749 true A08: 8232529-8245277 Brassica rapa FPsc
Brara.H00636 10.0kb downstream 10.0kb downstream 10000 false A08: 8232529-8242528 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355737 5261 Brassicaceae Singleton cluster - no MSA
123793931 5264 Brassicales-Malvales Singleton cluster - no MSA
124291755 5266 SBM Singleton cluster - no MSA
124144648 5268 Malvidae Singleton cluster - no MSA
123871163 5270 Rosid Singleton cluster - no MSA
123455442 5271 Pentapetalae Singleton cluster - no MSA
122490877 5272 Eudicot Singleton cluster - no MSA
122043704 5273 Angiosperm View MSA
121346225 5274 Embryophyte View MSA
123380350 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier