Gene : Brara.D02675 B. rapa FPsc v1.3

Defline:  (1 of 76) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  2675
Name:  ? Brara.D02675 Secondary Identifier:  ? PAC:30620218

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02675 0.5kb upstream 0.5kb upstream 2998 true A04: 20551485-20554482 Brassica rapa FPsc
Brara.D02675 0.5kb upstream 0.5kb upstream 500 false A04: 20551485-20551984 Brassica rapa FPsc
Brara.D02675 0.5kb downstream 0.5kb downstream 2998 true A04: 20551985-20554982 Brassica rapa FPsc
Brara.D02675 0.5kb downstream 0.5kb downstream 500 false A04: 20554483-20554982 Brassica rapa FPsc
Brara.D02675 1.0kb upstream 1.0kb upstream 3498 true A04: 20550985-20554482 Brassica rapa FPsc
Brara.D02675 1.0kb upstream 1.0kb upstream 1000 false A04: 20550985-20551984 Brassica rapa FPsc
Brara.D02675 1.0kb downstream 1.0kb downstream 3498 true A04: 20551985-20555482 Brassica rapa FPsc
Brara.D02675 1.0kb downstream 1.0kb downstream 1000 false A04: 20554483-20555482 Brassica rapa FPsc
Brara.D02675 2.0kb upstream 2.0kb upstream 4498 true A04: 20549985-20554482 Brassica rapa FPsc
Brara.D02675 2.0kb upstream 2.0kb upstream 2000 false A04: 20549985-20551984 Brassica rapa FPsc
Brara.D02675 2.0kb downstream 2.0kb downstream 4498 true A04: 20551985-20556482 Brassica rapa FPsc
Brara.D02675 2.0kb downstream 2.0kb downstream 2000 false A04: 20554483-20556482 Brassica rapa FPsc
Brara.D02675 5.0kb upstream 5.0kb upstream 7498 true A04: 20546985-20554482 Brassica rapa FPsc
Brara.D02675 5.0kb upstream 5.0kb upstream 5000 false A04: 20546985-20551984 Brassica rapa FPsc
Brara.D02675 5.0kb downstream 5.0kb downstream 7498 true A04: 20551985-20559482 Brassica rapa FPsc
Brara.D02675 5.0kb downstream 5.0kb downstream 5000 false A04: 20554483-20559482 Brassica rapa FPsc
Brara.D02675 10.0kb upstream 10.0kb upstream 12498 true A04: 20541985-20554482 Brassica rapa FPsc
Brara.D02675 10.0kb upstream 10.0kb upstream 10000 false A04: 20541985-20551984 Brassica rapa FPsc
Brara.D02675 10.0kb downstream 10.0kb downstream 12498 true A04: 20551985-20564482 Brassica rapa FPsc
Brara.D02675 10.0kb downstream 10.0kb downstream 10000 false A04: 20554483-20564482 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370652 5261 Brassicaceae View MSA
123840240 5264 Brassicales-Malvales View MSA
124345143 5266 SBM View MSA
124243154 5268 Malvidae View MSA
124066390 5270 Rosid View MSA
123747844 5271 Pentapetalae View MSA
122788467 5272 Eudicot View MSA
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier