Gene : Brara.B00567 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11002:SF7 - CARBONIC ANHYDRASE 2, CHLOROPLASTIC-RELATED Genomic Order:  567
Name:  ? Brara.B00567 Secondary Identifier:  ? PAC:30608185
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYANCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-241 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  
BrapaFPsc PWYQT-4429 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00567 0.5kb upstream 0.5kb upstream 4748 true A02: 2590804-2595551 Brassica rapa FPsc
Brara.B00567 0.5kb upstream 0.5kb upstream 500 false A02: 2590804-2591303 Brassica rapa FPsc
Brara.B00567 0.5kb downstream 0.5kb downstream 4748 true A02: 2591304-2596051 Brassica rapa FPsc
Brara.B00567 0.5kb downstream 0.5kb downstream 500 false A02: 2595552-2596051 Brassica rapa FPsc
Brara.B00567 1.0kb upstream 1.0kb upstream 5248 true A02: 2590304-2595551 Brassica rapa FPsc
Brara.B00567 1.0kb upstream 1.0kb upstream 1000 false A02: 2590304-2591303 Brassica rapa FPsc
Brara.B00567 1.0kb downstream 1.0kb downstream 5248 true A02: 2591304-2596551 Brassica rapa FPsc
Brara.B00567 1.0kb downstream 1.0kb downstream 1000 false A02: 2595552-2596551 Brassica rapa FPsc
Brara.B00567 2.0kb upstream 2.0kb upstream 6248 true A02: 2589304-2595551 Brassica rapa FPsc
Brara.B00567 2.0kb upstream 2.0kb upstream 2000 false A02: 2589304-2591303 Brassica rapa FPsc
Brara.B00567 2.0kb downstream 2.0kb downstream 6248 true A02: 2591304-2597551 Brassica rapa FPsc
Brara.B00567 2.0kb downstream 2.0kb downstream 2000 false A02: 2595552-2597551 Brassica rapa FPsc
Brara.B00567 5.0kb upstream 5.0kb upstream 9248 true A02: 2586304-2595551 Brassica rapa FPsc
Brara.B00567 5.0kb upstream 5.0kb upstream 5000 false A02: 2586304-2591303 Brassica rapa FPsc
Brara.B00567 5.0kb downstream 5.0kb downstream 9248 true A02: 2591304-2600551 Brassica rapa FPsc
Brara.B00567 5.0kb downstream 5.0kb downstream 5000 false A02: 2595552-2600551 Brassica rapa FPsc
Brara.B00567 10.0kb upstream 10.0kb upstream 14248 true A02: 2581304-2595551 Brassica rapa FPsc
Brara.B00567 10.0kb upstream 10.0kb upstream 10000 false A02: 2581304-2591303 Brassica rapa FPsc
Brara.B00567 10.0kb downstream 10.0kb downstream 14248 true A02: 2591304-2605551 Brassica rapa FPsc
Brara.B00567 10.0kb downstream 10.0kb downstream 10000 false A02: 2595552-2605551 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366911 5261 Brassicaceae View MSA
123799264 5264 Brassicales-Malvales View MSA
124296805 5266 SBM View MSA
124252567 5268 Malvidae View MSA
124069679 5270 Rosid View MSA
123748034 5271 Pentapetalae View MSA
122785685 5272 Eudicot View MSA
122044024 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier