Gene : Brara.D02604 B. rapa FPsc v1.3
Defline:  (1 of 6) 1.5.3.16//1.5.3.17 - Spermine oxidase / SMO // Non-specific polyamine oxidase / Polyamine oxidase Genomic Order:  2604
Name:  ? Brara.D02604 Secondary Identifier:  ? PAC:30620842
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6441 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02604 0.5kb upstream 0.5kb upstream 4506 true A04: 20215104-20219609 Brassica rapa FPsc
Brara.D02604 0.5kb upstream 0.5kb upstream 500 false A04: 20215104-20215603 Brassica rapa FPsc
Brara.D02604 0.5kb downstream 0.5kb downstream 4506 true A04: 20215604-20220109 Brassica rapa FPsc
Brara.D02604 0.5kb downstream 0.5kb downstream 500 false A04: 20219610-20220109 Brassica rapa FPsc
Brara.D02604 1.0kb upstream 1.0kb upstream 5006 true A04: 20214604-20219609 Brassica rapa FPsc
Brara.D02604 1.0kb upstream 1.0kb upstream 1000 false A04: 20214604-20215603 Brassica rapa FPsc
Brara.D02604 1.0kb downstream 1.0kb downstream 5006 true A04: 20215604-20220609 Brassica rapa FPsc
Brara.D02604 1.0kb downstream 1.0kb downstream 1000 false A04: 20219610-20220609 Brassica rapa FPsc
Brara.D02604 2.0kb upstream 2.0kb upstream 6006 true A04: 20213604-20219609 Brassica rapa FPsc
Brara.D02604 2.0kb upstream 2.0kb upstream 2000 false A04: 20213604-20215603 Brassica rapa FPsc
Brara.D02604 2.0kb downstream 2.0kb downstream 6006 true A04: 20215604-20221609 Brassica rapa FPsc
Brara.D02604 2.0kb downstream 2.0kb downstream 2000 false A04: 20219610-20221609 Brassica rapa FPsc
Brara.D02604 5.0kb upstream 5.0kb upstream 9006 true A04: 20210604-20219609 Brassica rapa FPsc
Brara.D02604 5.0kb upstream 5.0kb upstream 5000 false A04: 20210604-20215603 Brassica rapa FPsc
Brara.D02604 5.0kb downstream 5.0kb downstream 9006 true A04: 20215604-20224609 Brassica rapa FPsc
Brara.D02604 5.0kb downstream 5.0kb downstream 5000 false A04: 20219610-20224609 Brassica rapa FPsc
Brara.D02604 10.0kb upstream 10.0kb upstream 14006 true A04: 20205604-20219609 Brassica rapa FPsc
Brara.D02604 10.0kb upstream 10.0kb upstream 10000 false A04: 20205604-20215603 Brassica rapa FPsc
Brara.D02604 10.0kb downstream 10.0kb downstream 14006 true A04: 20215604-20229609 Brassica rapa FPsc
Brara.D02604 10.0kb downstream 10.0kb downstream 10000 false A04: 20219610-20229609 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373356 5261 Brassicaceae View MSA
123831271 5264 Brassicales-Malvales View MSA
124342575 5266 SBM View MSA
124244923 5268 Malvidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier