Gene : Brara.H02072 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Genomic Order:  2072
Name:  ? Brara.H02072 Secondary Identifier:  ? PAC:30647342
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02072 0.5kb upstream 0.5kb upstream 4077 true A08: 18635016-18639092 Brassica rapa FPsc
Brara.H02072 0.5kb upstream 0.5kb upstream 500 false A08: 18635016-18635515 Brassica rapa FPsc
Brara.H02072 0.5kb downstream 0.5kb downstream 4077 true A08: 18635516-18639592 Brassica rapa FPsc
Brara.H02072 0.5kb downstream 0.5kb downstream 500 false A08: 18639093-18639592 Brassica rapa FPsc
Brara.H02072 1.0kb upstream 1.0kb upstream 4577 true A08: 18634516-18639092 Brassica rapa FPsc
Brara.H02072 1.0kb upstream 1.0kb upstream 1000 false A08: 18634516-18635515 Brassica rapa FPsc
Brara.H02072 1.0kb downstream 1.0kb downstream 4577 true A08: 18635516-18640092 Brassica rapa FPsc
Brara.H02072 1.0kb downstream 1.0kb downstream 1000 false A08: 18639093-18640092 Brassica rapa FPsc
Brara.H02072 2.0kb upstream 2.0kb upstream 5577 true A08: 18633516-18639092 Brassica rapa FPsc
Brara.H02072 2.0kb upstream 2.0kb upstream 2000 false A08: 18633516-18635515 Brassica rapa FPsc
Brara.H02072 2.0kb downstream 2.0kb downstream 5577 true A08: 18635516-18641092 Brassica rapa FPsc
Brara.H02072 2.0kb downstream 2.0kb downstream 2000 false A08: 18639093-18641092 Brassica rapa FPsc
Brara.H02072 5.0kb upstream 5.0kb upstream 8577 true A08: 18630516-18639092 Brassica rapa FPsc
Brara.H02072 5.0kb upstream 5.0kb upstream 5000 false A08: 18630516-18635515 Brassica rapa FPsc
Brara.H02072 5.0kb downstream 5.0kb downstream 8577 true A08: 18635516-18644092 Brassica rapa FPsc
Brara.H02072 5.0kb downstream 5.0kb downstream 5000 false A08: 18639093-18644092 Brassica rapa FPsc
Brara.H02072 10.0kb upstream 10.0kb upstream 13577 true A08: 18625516-18639092 Brassica rapa FPsc
Brara.H02072 10.0kb upstream 10.0kb upstream 10000 false A08: 18625516-18635515 Brassica rapa FPsc
Brara.H02072 10.0kb downstream 10.0kb downstream 13577 true A08: 18635516-18649092 Brassica rapa FPsc
Brara.H02072 10.0kb downstream 10.0kb downstream 10000 false A08: 18639093-18649092 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377197 5261 Brassicaceae View MSA
123836978 5264 Brassicales-Malvales View MSA
124341727 5266 SBM View MSA
124239418 5268 Malvidae View MSA
124065910 5270 Rosid View MSA
123743713 5271 Pentapetalae View MSA
122796921 5272 Eudicot View MSA
122048855 5273 Angiosperm View MSA
121345281 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier