Gene : Brara.H02052 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11062:SF105 - BETA-1,4-XYLOSYLTRANSFERASE IRX10-RELATED Genomic Order:  2052
Name:  ? Brara.H02052 Secondary Identifier:  ? PAC:30649390
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5980 Brassica rapa FPsc pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02052 0.5kb upstream 0.5kb upstream 2840 true A08: 18553343-18556182 Brassica rapa FPsc
Brara.H02052 0.5kb upstream 0.5kb upstream 500 false A08: 18553343-18553842 Brassica rapa FPsc
Brara.H02052 0.5kb downstream 0.5kb downstream 2840 true A08: 18553843-18556682 Brassica rapa FPsc
Brara.H02052 0.5kb downstream 0.5kb downstream 500 false A08: 18556183-18556682 Brassica rapa FPsc
Brara.H02052 1.0kb upstream 1.0kb upstream 3340 true A08: 18552843-18556182 Brassica rapa FPsc
Brara.H02052 1.0kb upstream 1.0kb upstream 1000 false A08: 18552843-18553842 Brassica rapa FPsc
Brara.H02052 1.0kb downstream 1.0kb downstream 3340 true A08: 18553843-18557182 Brassica rapa FPsc
Brara.H02052 1.0kb downstream 1.0kb downstream 1000 false A08: 18556183-18557182 Brassica rapa FPsc
Brara.H02052 2.0kb upstream 2.0kb upstream 4340 true A08: 18551843-18556182 Brassica rapa FPsc
Brara.H02052 2.0kb upstream 2.0kb upstream 2000 false A08: 18551843-18553842 Brassica rapa FPsc
Brara.H02052 2.0kb downstream 2.0kb downstream 4340 true A08: 18553843-18558182 Brassica rapa FPsc
Brara.H02052 2.0kb downstream 2.0kb downstream 2000 false A08: 18556183-18558182 Brassica rapa FPsc
Brara.H02052 5.0kb upstream 5.0kb upstream 7340 true A08: 18548843-18556182 Brassica rapa FPsc
Brara.H02052 5.0kb upstream 5.0kb upstream 5000 false A08: 18548843-18553842 Brassica rapa FPsc
Brara.H02052 5.0kb downstream 5.0kb downstream 7340 true A08: 18553843-18561182 Brassica rapa FPsc
Brara.H02052 5.0kb downstream 5.0kb downstream 5000 false A08: 18556183-18561182 Brassica rapa FPsc
Brara.H02052 10.0kb upstream 10.0kb upstream 12340 true A08: 18543843-18556182 Brassica rapa FPsc
Brara.H02052 10.0kb upstream 10.0kb upstream 10000 false A08: 18543843-18553842 Brassica rapa FPsc
Brara.H02052 10.0kb downstream 10.0kb downstream 12340 true A08: 18553843-18566182 Brassica rapa FPsc
Brara.H02052 10.0kb downstream 10.0kb downstream 10000 false A08: 18556183-18566182 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377800 5261 Brassicaceae View MSA
123828573 5264 Brassicales-Malvales View MSA
124337730 5266 SBM View MSA
124244464 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier