Gene : Brara.E00181 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11586:SF1 - NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN Genomic Order:  181
Name:  ? Brara.E00181 Secondary Identifier:  ? PAC:30625317
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00181 0.5kb upstream 0.5kb upstream 2855 true A05: 1027367-1030221 Brassica rapa FPsc
Brara.E00181 0.5kb upstream 0.5kb upstream 500 false A05: 1027367-1027866 Brassica rapa FPsc
Brara.E00181 0.5kb downstream 0.5kb downstream 2855 true A05: 1027867-1030721 Brassica rapa FPsc
Brara.E00181 0.5kb downstream 0.5kb downstream 500 false A05: 1030222-1030721 Brassica rapa FPsc
Brara.E00181 1.0kb upstream 1.0kb upstream 3355 true A05: 1026867-1030221 Brassica rapa FPsc
Brara.E00181 1.0kb upstream 1.0kb upstream 1000 false A05: 1026867-1027866 Brassica rapa FPsc
Brara.E00181 1.0kb downstream 1.0kb downstream 3355 true A05: 1027867-1031221 Brassica rapa FPsc
Brara.E00181 1.0kb downstream 1.0kb downstream 1000 false A05: 1030222-1031221 Brassica rapa FPsc
Brara.E00181 2.0kb upstream 2.0kb upstream 4355 true A05: 1025867-1030221 Brassica rapa FPsc
Brara.E00181 2.0kb upstream 2.0kb upstream 2000 false A05: 1025867-1027866 Brassica rapa FPsc
Brara.E00181 2.0kb downstream 2.0kb downstream 4355 true A05: 1027867-1032221 Brassica rapa FPsc
Brara.E00181 2.0kb downstream 2.0kb downstream 2000 false A05: 1030222-1032221 Brassica rapa FPsc
Brara.E00181 5.0kb upstream 5.0kb upstream 7355 true A05: 1022867-1030221 Brassica rapa FPsc
Brara.E00181 5.0kb upstream 5.0kb upstream 5000 false A05: 1022867-1027866 Brassica rapa FPsc
Brara.E00181 5.0kb downstream 5.0kb downstream 7355 true A05: 1027867-1035221 Brassica rapa FPsc
Brara.E00181 5.0kb downstream 5.0kb downstream 5000 false A05: 1030222-1035221 Brassica rapa FPsc
Brara.E00181 10.0kb upstream 10.0kb upstream 12355 true A05: 1017867-1030221 Brassica rapa FPsc
Brara.E00181 10.0kb upstream 10.0kb upstream 10000 false A05: 1017867-1027866 Brassica rapa FPsc
Brara.E00181 10.0kb downstream 10.0kb downstream 12355 true A05: 1027867-1040221 Brassica rapa FPsc
Brara.E00181 10.0kb downstream 10.0kb downstream 10000 false A05: 1030222-1040221 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372616 5261 Brassicaceae View MSA
123838875 5264 Brassicales-Malvales View MSA
124339566 5266 SBM View MSA
124237749 5268 Malvidae View MSA
124063262 5270 Rosid View MSA
123740350 5271 Pentapetalae View MSA
122787501 5272 Eudicot View MSA
122043552 5273 Angiosperm View MSA
121350669 5274 Embryophyte View MSA
123427531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier