Gene : Brara.B01093 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN Genomic Order:  1093
Name:  ? Brara.B01093 Secondary Identifier:  ? PAC:30609609
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01093 0.5kb upstream 0.5kb upstream 2351 true A02: 5435414-5437764 Brassica rapa FPsc
Brara.B01093 0.5kb upstream 0.5kb upstream 500 false A02: 5435414-5435913 Brassica rapa FPsc
Brara.B01093 0.5kb downstream 0.5kb downstream 2351 true A02: 5435914-5438264 Brassica rapa FPsc
Brara.B01093 0.5kb downstream 0.5kb downstream 500 false A02: 5437765-5438264 Brassica rapa FPsc
Brara.B01093 1.0kb upstream 1.0kb upstream 2851 true A02: 5434914-5437764 Brassica rapa FPsc
Brara.B01093 1.0kb upstream 1.0kb upstream 1000 false A02: 5434914-5435913 Brassica rapa FPsc
Brara.B01093 1.0kb downstream 1.0kb downstream 2851 true A02: 5435914-5438764 Brassica rapa FPsc
Brara.B01093 1.0kb downstream 1.0kb downstream 1000 false A02: 5437765-5438764 Brassica rapa FPsc
Brara.B01093 2.0kb upstream 2.0kb upstream 3851 true A02: 5433914-5437764 Brassica rapa FPsc
Brara.B01093 2.0kb upstream 2.0kb upstream 2000 false A02: 5433914-5435913 Brassica rapa FPsc
Brara.B01093 2.0kb downstream 2.0kb downstream 3851 true A02: 5435914-5439764 Brassica rapa FPsc
Brara.B01093 2.0kb downstream 2.0kb downstream 2000 false A02: 5437765-5439764 Brassica rapa FPsc
Brara.B01093 5.0kb upstream 5.0kb upstream 6851 true A02: 5430914-5437764 Brassica rapa FPsc
Brara.B01093 5.0kb upstream 5.0kb upstream 5000 false A02: 5430914-5435913 Brassica rapa FPsc
Brara.B01093 5.0kb downstream 5.0kb downstream 6851 true A02: 5435914-5442764 Brassica rapa FPsc
Brara.B01093 5.0kb downstream 5.0kb downstream 5000 false A02: 5437765-5442764 Brassica rapa FPsc
Brara.B01093 10.0kb upstream 10.0kb upstream 11851 true A02: 5425914-5437764 Brassica rapa FPsc
Brara.B01093 10.0kb upstream 10.0kb upstream 10000 false A02: 5425914-5435913 Brassica rapa FPsc
Brara.B01093 10.0kb downstream 10.0kb downstream 11851 true A02: 5435914-5447764 Brassica rapa FPsc
Brara.B01093 10.0kb downstream 10.0kb downstream 10000 false A02: 5437765-5447764 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376466 5261 Brassicaceae View MSA
123838117 5264 Brassicales-Malvales View MSA
124341456 5266 SBM View MSA
124249586 5268 Malvidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier