Gene : Brara.H02520 B. rapa FPsc v1.3
Defline:  (1 of 8) PTHR12663:SF3 - ASPARTYL BETA-HYDROXYLASE N-TERMINAL REGION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2520
Name:  ? Brara.H02520 Secondary Identifier:  ? PAC:30649808
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02520 0.5kb upstream 0.5kb upstream 5496 true A08: 20781486-20786981 Brassica rapa FPsc
Brara.H02520 0.5kb upstream 0.5kb upstream 500 false A08: 20786482-20786981 Brassica rapa FPsc
Brara.H02520 0.5kb downstream 0.5kb downstream 5496 true A08: 20780986-20786481 Brassica rapa FPsc
Brara.H02520 0.5kb downstream 0.5kb downstream 500 false A08: 20780986-20781485 Brassica rapa FPsc
Brara.H02520 1.0kb upstream 1.0kb upstream 5996 true A08: 20781486-20787481 Brassica rapa FPsc
Brara.H02520 1.0kb upstream 1.0kb upstream 1000 false A08: 20786482-20787481 Brassica rapa FPsc
Brara.H02520 1.0kb downstream 1.0kb downstream 5996 true A08: 20780486-20786481 Brassica rapa FPsc
Brara.H02520 1.0kb downstream 1.0kb downstream 1000 false A08: 20780486-20781485 Brassica rapa FPsc
Brara.H02520 2.0kb upstream 2.0kb upstream 6996 true A08: 20781486-20788481 Brassica rapa FPsc
Brara.H02520 2.0kb upstream 2.0kb upstream 2000 false A08: 20786482-20788481 Brassica rapa FPsc
Brara.H02520 2.0kb downstream 2.0kb downstream 6996 true A08: 20779486-20786481 Brassica rapa FPsc
Brara.H02520 2.0kb downstream 2.0kb downstream 2000 false A08: 20779486-20781485 Brassica rapa FPsc
Brara.H02520 5.0kb upstream 5.0kb upstream 9996 true A08: 20781486-20791481 Brassica rapa FPsc
Brara.H02520 5.0kb upstream 5.0kb upstream 5000 false A08: 20786482-20791481 Brassica rapa FPsc
Brara.H02520 5.0kb downstream 5.0kb downstream 9996 true A08: 20776486-20786481 Brassica rapa FPsc
Brara.H02520 5.0kb downstream 5.0kb downstream 5000 false A08: 20776486-20781485 Brassica rapa FPsc
Brara.H02520 10.0kb upstream 10.0kb upstream 14996 true A08: 20781486-20796481 Brassica rapa FPsc
Brara.H02520 10.0kb upstream 10.0kb upstream 10000 false A08: 20786482-20796481 Brassica rapa FPsc
Brara.H02520 10.0kb downstream 10.0kb downstream 14996 true A08: 20771486-20786481 Brassica rapa FPsc
Brara.H02520 10.0kb downstream 10.0kb downstream 10000 false A08: 20771486-20781485 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355628 5261 Brassicaceae Singleton cluster - no MSA
123793835 5264 Brassicales-Malvales Singleton cluster - no MSA
124291659 5266 SBM Singleton cluster - no MSA
124251613 5268 Malvidae View MSA
124073544 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier