Gene : Brara.H01936 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR33199:SF3 - MACPF DOMAIN-CONTAINING PROTEIN CAD1 Genomic Order:  1936
Name:  ? Brara.H01936 Secondary Identifier:  ? PAC:30647039
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01936 0.5kb upstream 0.5kb upstream 3729 true A08: 17969956-17973684 Brassica rapa FPsc
Brara.H01936 0.5kb upstream 0.5kb upstream 500 false A08: 17969956-17970455 Brassica rapa FPsc
Brara.H01936 0.5kb downstream 0.5kb downstream 3729 true A08: 17970456-17974184 Brassica rapa FPsc
Brara.H01936 0.5kb downstream 0.5kb downstream 500 false A08: 17973685-17974184 Brassica rapa FPsc
Brara.H01936 1.0kb upstream 1.0kb upstream 4229 true A08: 17969456-17973684 Brassica rapa FPsc
Brara.H01936 1.0kb upstream 1.0kb upstream 1000 false A08: 17969456-17970455 Brassica rapa FPsc
Brara.H01936 1.0kb downstream 1.0kb downstream 4229 true A08: 17970456-17974684 Brassica rapa FPsc
Brara.H01936 1.0kb downstream 1.0kb downstream 1000 false A08: 17973685-17974684 Brassica rapa FPsc
Brara.H01936 2.0kb upstream 2.0kb upstream 5229 true A08: 17968456-17973684 Brassica rapa FPsc
Brara.H01936 2.0kb upstream 2.0kb upstream 2000 false A08: 17968456-17970455 Brassica rapa FPsc
Brara.H01936 2.0kb downstream 2.0kb downstream 5229 true A08: 17970456-17975684 Brassica rapa FPsc
Brara.H01936 2.0kb downstream 2.0kb downstream 2000 false A08: 17973685-17975684 Brassica rapa FPsc
Brara.H01936 5.0kb upstream 5.0kb upstream 8229 true A08: 17965456-17973684 Brassica rapa FPsc
Brara.H01936 5.0kb upstream 5.0kb upstream 5000 false A08: 17965456-17970455 Brassica rapa FPsc
Brara.H01936 5.0kb downstream 5.0kb downstream 8229 true A08: 17970456-17978684 Brassica rapa FPsc
Brara.H01936 5.0kb downstream 5.0kb downstream 5000 false A08: 17973685-17978684 Brassica rapa FPsc
Brara.H01936 10.0kb upstream 10.0kb upstream 13229 true A08: 17960456-17973684 Brassica rapa FPsc
Brara.H01936 10.0kb upstream 10.0kb upstream 10000 false A08: 17960456-17970455 Brassica rapa FPsc
Brara.H01936 10.0kb downstream 10.0kb downstream 13229 true A08: 17970456-17983684 Brassica rapa FPsc
Brara.H01936 10.0kb downstream 10.0kb downstream 10000 false A08: 17973685-17983684 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370667 5261 Brassicaceae View MSA
123830293 5264 Brassicales-Malvales View MSA
124347308 5266 SBM View MSA
124245420 5268 Malvidae View MSA
124063432 5270 Rosid View MSA
123741533 5271 Pentapetalae View MSA
122797212 5272 Eudicot View MSA
122044022 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier