Gene : Brara.H01692 B. rapa FPsc v1.3
Defline:  (1 of 8) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED Genomic Order:  1692
Name:  ? Brara.H01692 Secondary Identifier:  ? PAC:30647178
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01692 0.5kb upstream 0.5kb upstream 1843 true A08: 16538857-16540699 Brassica rapa FPsc
Brara.H01692 0.5kb upstream 0.5kb upstream 500 false A08: 16540200-16540699 Brassica rapa FPsc
Brara.H01692 0.5kb downstream 0.5kb downstream 1843 true A08: 16538357-16540199 Brassica rapa FPsc
Brara.H01692 0.5kb downstream 0.5kb downstream 500 false A08: 16538357-16538856 Brassica rapa FPsc
Brara.H01692 1.0kb upstream 1.0kb upstream 2343 true A08: 16538857-16541199 Brassica rapa FPsc
Brara.H01692 1.0kb upstream 1.0kb upstream 1000 false A08: 16540200-16541199 Brassica rapa FPsc
Brara.H01692 1.0kb downstream 1.0kb downstream 2343 true A08: 16537857-16540199 Brassica rapa FPsc
Brara.H01692 1.0kb downstream 1.0kb downstream 1000 false A08: 16537857-16538856 Brassica rapa FPsc
Brara.H01692 2.0kb upstream 2.0kb upstream 3343 true A08: 16538857-16542199 Brassica rapa FPsc
Brara.H01692 2.0kb upstream 2.0kb upstream 2000 false A08: 16540200-16542199 Brassica rapa FPsc
Brara.H01692 2.0kb downstream 2.0kb downstream 3343 true A08: 16536857-16540199 Brassica rapa FPsc
Brara.H01692 2.0kb downstream 2.0kb downstream 2000 false A08: 16536857-16538856 Brassica rapa FPsc
Brara.H01692 5.0kb upstream 5.0kb upstream 6343 true A08: 16538857-16545199 Brassica rapa FPsc
Brara.H01692 5.0kb upstream 5.0kb upstream 5000 false A08: 16540200-16545199 Brassica rapa FPsc
Brara.H01692 5.0kb downstream 5.0kb downstream 6343 true A08: 16533857-16540199 Brassica rapa FPsc
Brara.H01692 5.0kb downstream 5.0kb downstream 5000 false A08: 16533857-16538856 Brassica rapa FPsc
Brara.H01692 10.0kb upstream 10.0kb upstream 11343 true A08: 16538857-16550199 Brassica rapa FPsc
Brara.H01692 10.0kb upstream 10.0kb upstream 10000 false A08: 16540200-16550199 Brassica rapa FPsc
Brara.H01692 10.0kb downstream 10.0kb downstream 11343 true A08: 16528857-16540199 Brassica rapa FPsc
Brara.H01692 10.0kb downstream 10.0kb downstream 10000 false A08: 16528857-16538856 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354853 5261 Brassicaceae Singleton cluster - no MSA
123793181 5264 Brassicales-Malvales Singleton cluster - no MSA
124291030 5266 SBM Singleton cluster - no MSA
124144054 5268 Malvidae Singleton cluster - no MSA
123870656 5270 Rosid Singleton cluster - no MSA
123647299 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier