Gene : Brara.E00043 B. rapa FPsc v1.3
Defline:  (1 of 3) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  43
Name:  ? Brara.E00043 Secondary Identifier:  ? PAC:30626712
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00043 0.5kb upstream 0.5kb upstream 3896 true A05: 221913-225808 Brassica rapa FPsc
Brara.E00043 0.5kb upstream 0.5kb upstream 500 false A05: 225309-225808 Brassica rapa FPsc
Brara.E00043 0.5kb downstream 0.5kb downstream 3896 true A05: 221413-225308 Brassica rapa FPsc
Brara.E00043 0.5kb downstream 0.5kb downstream 500 false A05: 221413-221912 Brassica rapa FPsc
Brara.E00043 1.0kb upstream 1.0kb upstream 4396 true A05: 221913-226308 Brassica rapa FPsc
Brara.E00043 1.0kb upstream 1.0kb upstream 1000 false A05: 225309-226308 Brassica rapa FPsc
Brara.E00043 1.0kb downstream 1.0kb downstream 4396 true A05: 220913-225308 Brassica rapa FPsc
Brara.E00043 1.0kb downstream 1.0kb downstream 1000 false A05: 220913-221912 Brassica rapa FPsc
Brara.E00043 2.0kb upstream 2.0kb upstream 5396 true A05: 221913-227308 Brassica rapa FPsc
Brara.E00043 2.0kb upstream 2.0kb upstream 2000 false A05: 225309-227308 Brassica rapa FPsc
Brara.E00043 2.0kb downstream 2.0kb downstream 5396 true A05: 219913-225308 Brassica rapa FPsc
Brara.E00043 2.0kb downstream 2.0kb downstream 2000 false A05: 219913-221912 Brassica rapa FPsc
Brara.E00043 5.0kb upstream 5.0kb upstream 8396 true A05: 221913-230308 Brassica rapa FPsc
Brara.E00043 5.0kb upstream 5.0kb upstream 5000 false A05: 225309-230308 Brassica rapa FPsc
Brara.E00043 5.0kb downstream 5.0kb downstream 8396 true A05: 216913-225308 Brassica rapa FPsc
Brara.E00043 5.0kb downstream 5.0kb downstream 5000 false A05: 216913-221912 Brassica rapa FPsc
Brara.E00043 10.0kb upstream 10.0kb upstream 13396 true A05: 221913-235308 Brassica rapa FPsc
Brara.E00043 10.0kb upstream 10.0kb upstream 10000 false A05: 225309-235308 Brassica rapa FPsc
Brara.E00043 10.0kb downstream 10.0kb downstream 13396 true A05: 211913-225308 Brassica rapa FPsc
Brara.E00043 10.0kb downstream 10.0kb downstream 10000 false A05: 211913-221912 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373971 5261 Brassicaceae View MSA
123829006 5264 Brassicales-Malvales View MSA
124336503 5266 SBM View MSA
124247146 5268 Malvidae View MSA
124069053 5270 Rosid View MSA
123742189 5271 Pentapetalae View MSA
122791396 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier