Gene : Brara.E00054 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR33921:SF2 - CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED Genomic Order:  54
Name:  ? Brara.E00054 Secondary Identifier:  ? PAC:30626403
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00054 0.5kb upstream 0.5kb upstream 881 true A05: 290805-291685 Brassica rapa FPsc
Brara.E00054 0.5kb upstream 0.5kb upstream 500 false A05: 291186-291685 Brassica rapa FPsc
Brara.E00054 0.5kb downstream 0.5kb downstream 881 true A05: 290305-291185 Brassica rapa FPsc
Brara.E00054 0.5kb downstream 0.5kb downstream 500 false A05: 290305-290804 Brassica rapa FPsc
Brara.E00054 1.0kb upstream 1.0kb upstream 1381 true A05: 290805-292185 Brassica rapa FPsc
Brara.E00054 1.0kb upstream 1.0kb upstream 1000 false A05: 291186-292185 Brassica rapa FPsc
Brara.E00054 1.0kb downstream 1.0kb downstream 1381 true A05: 289805-291185 Brassica rapa FPsc
Brara.E00054 1.0kb downstream 1.0kb downstream 1000 false A05: 289805-290804 Brassica rapa FPsc
Brara.E00054 2.0kb upstream 2.0kb upstream 2381 true A05: 290805-293185 Brassica rapa FPsc
Brara.E00054 2.0kb upstream 2.0kb upstream 2000 false A05: 291186-293185 Brassica rapa FPsc
Brara.E00054 2.0kb downstream 2.0kb downstream 2381 true A05: 288805-291185 Brassica rapa FPsc
Brara.E00054 2.0kb downstream 2.0kb downstream 2000 false A05: 288805-290804 Brassica rapa FPsc
Brara.E00054 5.0kb upstream 5.0kb upstream 5381 true A05: 290805-296185 Brassica rapa FPsc
Brara.E00054 5.0kb upstream 5.0kb upstream 5000 false A05: 291186-296185 Brassica rapa FPsc
Brara.E00054 5.0kb downstream 5.0kb downstream 5381 true A05: 285805-291185 Brassica rapa FPsc
Brara.E00054 5.0kb downstream 5.0kb downstream 5000 false A05: 285805-290804 Brassica rapa FPsc
Brara.E00054 10.0kb upstream 10.0kb upstream 10381 true A05: 290805-301185 Brassica rapa FPsc
Brara.E00054 10.0kb upstream 10.0kb upstream 10000 false A05: 291186-301185 Brassica rapa FPsc
Brara.E00054 10.0kb downstream 10.0kb downstream 10381 true A05: 280805-291185 Brassica rapa FPsc
Brara.E00054 10.0kb downstream 10.0kb downstream 10000 false A05: 280805-290804 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349791 5261 Brassicaceae Singleton cluster - no MSA
123788923 5264 Brassicales-Malvales Singleton cluster - no MSA
124286939 5266 SBM Singleton cluster - no MSA
124254040 5268 Malvidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier