Gene : Brara.H01310 B. rapa FPsc v1.3
Defline:  (1 of 11) 2.1.2.1 - Glycine hydroxymethyltransferase / Threonine aldolase Genomic Order:  1310
Name:  ? Brara.H01310 Secondary Identifier:  ? PAC:30647093
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLYSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-2161 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3841 Brassica rapa FPsc pathologic  
BrapaFPsc SER-GLYSYN-PWY Brassica rapa FPsc pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01310 0.5kb upstream 0.5kb upstream 3494 true A08: 14266355-14269848 Brassica rapa FPsc
Brara.H01310 0.5kb upstream 0.5kb upstream 500 false A08: 14266355-14266854 Brassica rapa FPsc
Brara.H01310 0.5kb downstream 0.5kb downstream 3494 true A08: 14266855-14270348 Brassica rapa FPsc
Brara.H01310 0.5kb downstream 0.5kb downstream 500 false A08: 14269849-14270348 Brassica rapa FPsc
Brara.H01310 1.0kb upstream 1.0kb upstream 3994 true A08: 14265855-14269848 Brassica rapa FPsc
Brara.H01310 1.0kb upstream 1.0kb upstream 1000 false A08: 14265855-14266854 Brassica rapa FPsc
Brara.H01310 1.0kb downstream 1.0kb downstream 3994 true A08: 14266855-14270848 Brassica rapa FPsc
Brara.H01310 1.0kb downstream 1.0kb downstream 1000 false A08: 14269849-14270848 Brassica rapa FPsc
Brara.H01310 2.0kb upstream 2.0kb upstream 4994 true A08: 14264855-14269848 Brassica rapa FPsc
Brara.H01310 2.0kb upstream 2.0kb upstream 2000 false A08: 14264855-14266854 Brassica rapa FPsc
Brara.H01310 2.0kb downstream 2.0kb downstream 4994 true A08: 14266855-14271848 Brassica rapa FPsc
Brara.H01310 2.0kb downstream 2.0kb downstream 2000 false A08: 14269849-14271848 Brassica rapa FPsc
Brara.H01310 5.0kb upstream 5.0kb upstream 7994 true A08: 14261855-14269848 Brassica rapa FPsc
Brara.H01310 5.0kb upstream 5.0kb upstream 5000 false A08: 14261855-14266854 Brassica rapa FPsc
Brara.H01310 5.0kb downstream 5.0kb downstream 7994 true A08: 14266855-14274848 Brassica rapa FPsc
Brara.H01310 5.0kb downstream 5.0kb downstream 5000 false A08: 14269849-14274848 Brassica rapa FPsc
Brara.H01310 10.0kb upstream 10.0kb upstream 12994 true A08: 14256855-14269848 Brassica rapa FPsc
Brara.H01310 10.0kb upstream 10.0kb upstream 10000 false A08: 14256855-14266854 Brassica rapa FPsc
Brara.H01310 10.0kb downstream 10.0kb downstream 12994 true A08: 14266855-14279848 Brassica rapa FPsc
Brara.H01310 10.0kb downstream 10.0kb downstream 10000 false A08: 14269849-14279848 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791751 5273 Angiosperm View MSA
122374291 5261 Brassicaceae View MSA
123833401 5264 Brassicales-Malvales View MSA
124340851 5266 SBM View MSA
124253423 5268 Malvidae View MSA
124062282 5270 Rosid View MSA
123744611 5271 Pentapetalae View MSA
122789540 5272 Eudicot View MSA
121345595 5274 Embryophyte View MSA
123425169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier