Gene : Brara.B01695 B. rapa FPsc v1.3
Defline:  (1 of 1) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  1695
Name:  ? Brara.B01695 Secondary Identifier:  ? PAC:30607995
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6809 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-695 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01695 0.5kb upstream 0.5kb upstream 2266 true A02: 9808022-9810287 Brassica rapa FPsc
Brara.B01695 0.5kb upstream 0.5kb upstream 500 false A02: 9809788-9810287 Brassica rapa FPsc
Brara.B01695 0.5kb downstream 0.5kb downstream 2266 true A02: 9807522-9809787 Brassica rapa FPsc
Brara.B01695 0.5kb downstream 0.5kb downstream 500 false A02: 9807522-9808021 Brassica rapa FPsc
Brara.B01695 1.0kb upstream 1.0kb upstream 2766 true A02: 9808022-9810787 Brassica rapa FPsc
Brara.B01695 1.0kb upstream 1.0kb upstream 1000 false A02: 9809788-9810787 Brassica rapa FPsc
Brara.B01695 1.0kb downstream 1.0kb downstream 2766 true A02: 9807022-9809787 Brassica rapa FPsc
Brara.B01695 1.0kb downstream 1.0kb downstream 1000 false A02: 9807022-9808021 Brassica rapa FPsc
Brara.B01695 2.0kb upstream 2.0kb upstream 3766 true A02: 9808022-9811787 Brassica rapa FPsc
Brara.B01695 2.0kb upstream 2.0kb upstream 2000 false A02: 9809788-9811787 Brassica rapa FPsc
Brara.B01695 2.0kb downstream 2.0kb downstream 3766 true A02: 9806022-9809787 Brassica rapa FPsc
Brara.B01695 2.0kb downstream 2.0kb downstream 2000 false A02: 9806022-9808021 Brassica rapa FPsc
Brara.B01695 5.0kb upstream 5.0kb upstream 6766 true A02: 9808022-9814787 Brassica rapa FPsc
Brara.B01695 5.0kb upstream 5.0kb upstream 5000 false A02: 9809788-9814787 Brassica rapa FPsc
Brara.B01695 5.0kb downstream 5.0kb downstream 6766 true A02: 9803022-9809787 Brassica rapa FPsc
Brara.B01695 5.0kb downstream 5.0kb downstream 5000 false A02: 9803022-9808021 Brassica rapa FPsc
Brara.B01695 10.0kb upstream 10.0kb upstream 11766 true A02: 9808022-9819787 Brassica rapa FPsc
Brara.B01695 10.0kb upstream 10.0kb upstream 10000 false A02: 9809788-9819787 Brassica rapa FPsc
Brara.B01695 10.0kb downstream 10.0kb downstream 11766 true A02: 9798022-9809787 Brassica rapa FPsc
Brara.B01695 10.0kb downstream 10.0kb downstream 10000 false A02: 9798022-9808021 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362178 5261 Brassicaceae View MSA
123832925 5264 Brassicales-Malvales View MSA
124339377 5266 SBM View MSA
124248470 5268 Malvidae View MSA
124062178 5270 Rosid View MSA
123748588 5271 Pentapetalae View MSA
122790006 5272 Eudicot View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier