Gene : Brara.E00374 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31155:SF9 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 7, CHLOROPLASTIC Genomic Order:  374
Name:  ? Brara.E00374 Secondary Identifier:  ? PAC:30625438
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5147 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5366 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00374 0.5kb upstream 0.5kb upstream 3363 true A05: 2054464-2057826 Brassica rapa FPsc
Brara.E00374 0.5kb upstream 0.5kb upstream 500 false A05: 2054464-2054963 Brassica rapa FPsc
Brara.E00374 0.5kb downstream 0.5kb downstream 3363 true A05: 2054964-2058326 Brassica rapa FPsc
Brara.E00374 0.5kb downstream 0.5kb downstream 500 false A05: 2057827-2058326 Brassica rapa FPsc
Brara.E00374 1.0kb upstream 1.0kb upstream 3863 true A05: 2053964-2057826 Brassica rapa FPsc
Brara.E00374 1.0kb upstream 1.0kb upstream 1000 false A05: 2053964-2054963 Brassica rapa FPsc
Brara.E00374 1.0kb downstream 1.0kb downstream 3863 true A05: 2054964-2058826 Brassica rapa FPsc
Brara.E00374 1.0kb downstream 1.0kb downstream 1000 false A05: 2057827-2058826 Brassica rapa FPsc
Brara.E00374 2.0kb upstream 2.0kb upstream 4863 true A05: 2052964-2057826 Brassica rapa FPsc
Brara.E00374 2.0kb upstream 2.0kb upstream 2000 false A05: 2052964-2054963 Brassica rapa FPsc
Brara.E00374 2.0kb downstream 2.0kb downstream 4863 true A05: 2054964-2059826 Brassica rapa FPsc
Brara.E00374 2.0kb downstream 2.0kb downstream 2000 false A05: 2057827-2059826 Brassica rapa FPsc
Brara.E00374 5.0kb upstream 5.0kb upstream 7863 true A05: 2049964-2057826 Brassica rapa FPsc
Brara.E00374 5.0kb upstream 5.0kb upstream 5000 false A05: 2049964-2054963 Brassica rapa FPsc
Brara.E00374 5.0kb downstream 5.0kb downstream 7863 true A05: 2054964-2062826 Brassica rapa FPsc
Brara.E00374 5.0kb downstream 5.0kb downstream 5000 false A05: 2057827-2062826 Brassica rapa FPsc
Brara.E00374 10.0kb upstream 10.0kb upstream 12863 true A05: 2044964-2057826 Brassica rapa FPsc
Brara.E00374 10.0kb upstream 10.0kb upstream 10000 false A05: 2044964-2054963 Brassica rapa FPsc
Brara.E00374 10.0kb downstream 10.0kb downstream 12863 true A05: 2054964-2067826 Brassica rapa FPsc
Brara.E00374 10.0kb downstream 10.0kb downstream 10000 false A05: 2057827-2067826 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349588 5261 Brassicaceae Singleton cluster - no MSA
123840023 5264 Brassicales-Malvales View MSA
124345427 5266 SBM View MSA
124243967 5268 Malvidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier