Gene : Brara.E00228 B. rapa FPsc v1.3
Defline:  (1 of 6) 1.1.1.8 - Glycerol-3-phosphate dehydrogenase (NAD(+)) / NADH-dihydroxyacetone phosphate reductase Genomic Order:  228
Name:  ? Brara.E00228 Secondary Identifier:  ? PAC:30625367
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6118 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7411 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00228 0.5kb upstream 0.5kb upstream 3817 true A05: 1278912-1282728 Brassica rapa FPsc
Brara.E00228 0.5kb upstream 0.5kb upstream 500 false A05: 1278912-1279411 Brassica rapa FPsc
Brara.E00228 0.5kb downstream 0.5kb downstream 3817 true A05: 1279412-1283228 Brassica rapa FPsc
Brara.E00228 0.5kb downstream 0.5kb downstream 500 false A05: 1282729-1283228 Brassica rapa FPsc
Brara.E00228 1.0kb upstream 1.0kb upstream 4317 true A05: 1278412-1282728 Brassica rapa FPsc
Brara.E00228 1.0kb upstream 1.0kb upstream 1000 false A05: 1278412-1279411 Brassica rapa FPsc
Brara.E00228 1.0kb downstream 1.0kb downstream 4317 true A05: 1279412-1283728 Brassica rapa FPsc
Brara.E00228 1.0kb downstream 1.0kb downstream 1000 false A05: 1282729-1283728 Brassica rapa FPsc
Brara.E00228 2.0kb upstream 2.0kb upstream 5317 true A05: 1277412-1282728 Brassica rapa FPsc
Brara.E00228 2.0kb upstream 2.0kb upstream 2000 false A05: 1277412-1279411 Brassica rapa FPsc
Brara.E00228 2.0kb downstream 2.0kb downstream 5317 true A05: 1279412-1284728 Brassica rapa FPsc
Brara.E00228 2.0kb downstream 2.0kb downstream 2000 false A05: 1282729-1284728 Brassica rapa FPsc
Brara.E00228 5.0kb upstream 5.0kb upstream 8317 true A05: 1274412-1282728 Brassica rapa FPsc
Brara.E00228 5.0kb upstream 5.0kb upstream 5000 false A05: 1274412-1279411 Brassica rapa FPsc
Brara.E00228 5.0kb downstream 5.0kb downstream 8317 true A05: 1279412-1287728 Brassica rapa FPsc
Brara.E00228 5.0kb downstream 5.0kb downstream 5000 false A05: 1282729-1287728 Brassica rapa FPsc
Brara.E00228 10.0kb upstream 10.0kb upstream 13317 true A05: 1269412-1282728 Brassica rapa FPsc
Brara.E00228 10.0kb upstream 10.0kb upstream 10000 false A05: 1269412-1279411 Brassica rapa FPsc
Brara.E00228 10.0kb downstream 10.0kb downstream 13317 true A05: 1279412-1292728 Brassica rapa FPsc
Brara.E00228 10.0kb downstream 10.0kb downstream 10000 false A05: 1282729-1292728 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349573 5261 Brassicaceae Singleton cluster - no MSA
123840011 5264 Brassicales-Malvales View MSA
124343706 5266 SBM View MSA
124251382 5268 Malvidae View MSA
124069658 5270 Rosid View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier