Gene : Brara.E00241 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31362:SF1 - EXPRESSED PROTEIN Genomic Order:  241
Name:  ? Brara.E00241 Secondary Identifier:  ? PAC:30625981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00241 0.5kb upstream 0.5kb upstream 3787 true A05: 1347561-1351347 Brassica rapa FPsc
Brara.E00241 0.5kb upstream 0.5kb upstream 500 false A05: 1350848-1351347 Brassica rapa FPsc
Brara.E00241 0.5kb downstream 0.5kb downstream 3787 true A05: 1347061-1350847 Brassica rapa FPsc
Brara.E00241 0.5kb downstream 0.5kb downstream 500 false A05: 1347061-1347560 Brassica rapa FPsc
Brara.E00241 1.0kb upstream 1.0kb upstream 4287 true A05: 1347561-1351847 Brassica rapa FPsc
Brara.E00241 1.0kb upstream 1.0kb upstream 1000 false A05: 1350848-1351847 Brassica rapa FPsc
Brara.E00241 1.0kb downstream 1.0kb downstream 4287 true A05: 1346561-1350847 Brassica rapa FPsc
Brara.E00241 1.0kb downstream 1.0kb downstream 1000 false A05: 1346561-1347560 Brassica rapa FPsc
Brara.E00241 2.0kb upstream 2.0kb upstream 5287 true A05: 1347561-1352847 Brassica rapa FPsc
Brara.E00241 2.0kb upstream 2.0kb upstream 2000 false A05: 1350848-1352847 Brassica rapa FPsc
Brara.E00241 2.0kb downstream 2.0kb downstream 5287 true A05: 1345561-1350847 Brassica rapa FPsc
Brara.E00241 2.0kb downstream 2.0kb downstream 2000 false A05: 1345561-1347560 Brassica rapa FPsc
Brara.E00241 5.0kb upstream 5.0kb upstream 8287 true A05: 1347561-1355847 Brassica rapa FPsc
Brara.E00241 5.0kb upstream 5.0kb upstream 5000 false A05: 1350848-1355847 Brassica rapa FPsc
Brara.E00241 5.0kb downstream 5.0kb downstream 8287 true A05: 1342561-1350847 Brassica rapa FPsc
Brara.E00241 5.0kb downstream 5.0kb downstream 5000 false A05: 1342561-1347560 Brassica rapa FPsc
Brara.E00241 10.0kb upstream 10.0kb upstream 13287 true A05: 1347561-1360847 Brassica rapa FPsc
Brara.E00241 10.0kb upstream 10.0kb upstream 10000 false A05: 1350848-1360847 Brassica rapa FPsc
Brara.E00241 10.0kb downstream 10.0kb downstream 13287 true A05: 1337561-1350847 Brassica rapa FPsc
Brara.E00241 10.0kb downstream 10.0kb downstream 10000 false A05: 1337561-1347560 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121505243 5273 Angiosperm Singleton cluster - no MSA
122349711 5261 Brassicaceae Singleton cluster - no MSA
123788854 5264 Brassicales-Malvales Singleton cluster - no MSA
124286873 5266 SBM Singleton cluster - no MSA
124140660 5268 Malvidae Singleton cluster - no MSA
123867840 5270 Rosid Singleton cluster - no MSA
123452631 5271 Pentapetalae Singleton cluster - no MSA
122488115 5272 Eudicot Singleton cluster - no MSA
120778461 5274 Embryophyte Singleton cluster - no MSA
123426431 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier