Gene : Brara.I00749 B. rapa FPsc v1.3
Defline:  (1 of 2) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase Genomic Order:  749
Name:  ? Brara.I00749 Secondary Identifier:  ? PAC:30646346
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5188 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5918 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00749 0.5kb upstream 0.5kb upstream 2659 true A09: 4208382-4211040 Brassica rapa FPsc
Brara.I00749 0.5kb upstream 0.5kb upstream 500 false A09: 4208382-4208881 Brassica rapa FPsc
Brara.I00749 0.5kb downstream 0.5kb downstream 2659 true A09: 4208882-4211540 Brassica rapa FPsc
Brara.I00749 0.5kb downstream 0.5kb downstream 500 false A09: 4211041-4211540 Brassica rapa FPsc
Brara.I00749 1.0kb upstream 1.0kb upstream 3159 true A09: 4207882-4211040 Brassica rapa FPsc
Brara.I00749 1.0kb upstream 1.0kb upstream 1000 false A09: 4207882-4208881 Brassica rapa FPsc
Brara.I00749 1.0kb downstream 1.0kb downstream 3159 true A09: 4208882-4212040 Brassica rapa FPsc
Brara.I00749 1.0kb downstream 1.0kb downstream 1000 false A09: 4211041-4212040 Brassica rapa FPsc
Brara.I00749 2.0kb upstream 2.0kb upstream 4159 true A09: 4206882-4211040 Brassica rapa FPsc
Brara.I00749 2.0kb upstream 2.0kb upstream 2000 false A09: 4206882-4208881 Brassica rapa FPsc
Brara.I00749 2.0kb downstream 2.0kb downstream 4159 true A09: 4208882-4213040 Brassica rapa FPsc
Brara.I00749 2.0kb downstream 2.0kb downstream 2000 false A09: 4211041-4213040 Brassica rapa FPsc
Brara.I00749 5.0kb upstream 5.0kb upstream 7159 true A09: 4203882-4211040 Brassica rapa FPsc
Brara.I00749 5.0kb upstream 5.0kb upstream 5000 false A09: 4203882-4208881 Brassica rapa FPsc
Brara.I00749 5.0kb downstream 5.0kb downstream 7159 true A09: 4208882-4216040 Brassica rapa FPsc
Brara.I00749 5.0kb downstream 5.0kb downstream 5000 false A09: 4211041-4216040 Brassica rapa FPsc
Brara.I00749 10.0kb upstream 10.0kb upstream 12159 true A09: 4198882-4211040 Brassica rapa FPsc
Brara.I00749 10.0kb upstream 10.0kb upstream 10000 false A09: 4198882-4208881 Brassica rapa FPsc
Brara.I00749 10.0kb downstream 10.0kb downstream 12159 true A09: 4208882-4221040 Brassica rapa FPsc
Brara.I00749 10.0kb downstream 10.0kb downstream 10000 false A09: 4211041-4221040 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377192 5261 Brassicaceae View MSA
123838013 5264 Brassicales-Malvales View MSA
124339096 5266 SBM View MSA
124239994 5268 Malvidae View MSA
124066610 5270 Rosid View MSA
123741000 5271 Pentapetalae View MSA
122796730 5272 Eudicot View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier