Gene : Brara.I00760 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR21256:SF2 - HISTIDINE BIOSYNTHESIS TRIFUNCTIONAL PROTEIN Genomic Order:  760
Name:  ? Brara.I00760 Secondary Identifier:  ? PAC:30645219
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HISTSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00760 0.5kb upstream 0.5kb upstream 3269 true A09: 4274116-4277384 Brassica rapa FPsc
Brara.I00760 0.5kb upstream 0.5kb upstream 500 false A09: 4276885-4277384 Brassica rapa FPsc
Brara.I00760 0.5kb downstream 0.5kb downstream 3269 true A09: 4273616-4276884 Brassica rapa FPsc
Brara.I00760 0.5kb downstream 0.5kb downstream 500 false A09: 4273616-4274115 Brassica rapa FPsc
Brara.I00760 1.0kb upstream 1.0kb upstream 3769 true A09: 4274116-4277884 Brassica rapa FPsc
Brara.I00760 1.0kb upstream 1.0kb upstream 1000 false A09: 4276885-4277884 Brassica rapa FPsc
Brara.I00760 1.0kb downstream 1.0kb downstream 3769 true A09: 4273116-4276884 Brassica rapa FPsc
Brara.I00760 1.0kb downstream 1.0kb downstream 1000 false A09: 4273116-4274115 Brassica rapa FPsc
Brara.I00760 2.0kb upstream 2.0kb upstream 4769 true A09: 4274116-4278884 Brassica rapa FPsc
Brara.I00760 2.0kb upstream 2.0kb upstream 2000 false A09: 4276885-4278884 Brassica rapa FPsc
Brara.I00760 2.0kb downstream 2.0kb downstream 4769 true A09: 4272116-4276884 Brassica rapa FPsc
Brara.I00760 2.0kb downstream 2.0kb downstream 2000 false A09: 4272116-4274115 Brassica rapa FPsc
Brara.I00760 5.0kb upstream 5.0kb upstream 7769 true A09: 4274116-4281884 Brassica rapa FPsc
Brara.I00760 5.0kb upstream 5.0kb upstream 5000 false A09: 4276885-4281884 Brassica rapa FPsc
Brara.I00760 5.0kb downstream 5.0kb downstream 7769 true A09: 4269116-4276884 Brassica rapa FPsc
Brara.I00760 5.0kb downstream 5.0kb downstream 5000 false A09: 4269116-4274115 Brassica rapa FPsc
Brara.I00760 10.0kb upstream 10.0kb upstream 12769 true A09: 4274116-4286884 Brassica rapa FPsc
Brara.I00760 10.0kb upstream 10.0kb upstream 10000 false A09: 4276885-4286884 Brassica rapa FPsc
Brara.I00760 10.0kb downstream 10.0kb downstream 12769 true A09: 4264116-4276884 Brassica rapa FPsc
Brara.I00760 10.0kb downstream 10.0kb downstream 10000 false A09: 4264116-4274115 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354353 5261 Brassicaceae Singleton cluster - no MSA
123839930 5264 Brassicales-Malvales View MSA
124340813 5266 SBM View MSA
124241188 5268 Malvidae View MSA
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier