Gene : Brara.I00789 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR14413 - RIBOSOMAL PROTEIN L17 Genomic Order:  789
Name:  ? Brara.I00789 Secondary Identifier:  ? PAC:30642726
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00789 0.5kb upstream 0.5kb upstream 2474 true A09: 4396217-4398690 Brassica rapa FPsc
Brara.I00789 0.5kb upstream 0.5kb upstream 500 false A09: 4398191-4398690 Brassica rapa FPsc
Brara.I00789 0.5kb downstream 0.5kb downstream 2474 true A09: 4395717-4398190 Brassica rapa FPsc
Brara.I00789 0.5kb downstream 0.5kb downstream 500 false A09: 4395717-4396216 Brassica rapa FPsc
Brara.I00789 1.0kb upstream 1.0kb upstream 2974 true A09: 4396217-4399190 Brassica rapa FPsc
Brara.I00789 1.0kb upstream 1.0kb upstream 1000 false A09: 4398191-4399190 Brassica rapa FPsc
Brara.I00789 1.0kb downstream 1.0kb downstream 2974 true A09: 4395217-4398190 Brassica rapa FPsc
Brara.I00789 1.0kb downstream 1.0kb downstream 1000 false A09: 4395217-4396216 Brassica rapa FPsc
Brara.I00789 2.0kb upstream 2.0kb upstream 3974 true A09: 4396217-4400190 Brassica rapa FPsc
Brara.I00789 2.0kb upstream 2.0kb upstream 2000 false A09: 4398191-4400190 Brassica rapa FPsc
Brara.I00789 2.0kb downstream 2.0kb downstream 3974 true A09: 4394217-4398190 Brassica rapa FPsc
Brara.I00789 2.0kb downstream 2.0kb downstream 2000 false A09: 4394217-4396216 Brassica rapa FPsc
Brara.I00789 5.0kb upstream 5.0kb upstream 6974 true A09: 4396217-4403190 Brassica rapa FPsc
Brara.I00789 5.0kb upstream 5.0kb upstream 5000 false A09: 4398191-4403190 Brassica rapa FPsc
Brara.I00789 5.0kb downstream 5.0kb downstream 6974 true A09: 4391217-4398190 Brassica rapa FPsc
Brara.I00789 5.0kb downstream 5.0kb downstream 5000 false A09: 4391217-4396216 Brassica rapa FPsc
Brara.I00789 10.0kb upstream 10.0kb upstream 11974 true A09: 4396217-4408190 Brassica rapa FPsc
Brara.I00789 10.0kb upstream 10.0kb upstream 10000 false A09: 4398191-4408190 Brassica rapa FPsc
Brara.I00789 10.0kb downstream 10.0kb downstream 11974 true A09: 4386217-4398190 Brassica rapa FPsc
Brara.I00789 10.0kb downstream 10.0kb downstream 10000 false A09: 4386217-4396216 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378834 5261 Brassicaceae View MSA
123832255 5264 Brassicales-Malvales View MSA
124343042 5266 SBM View MSA
124243000 5268 Malvidae View MSA
124060746 5270 Rosid View MSA
123739029 5271 Pentapetalae View MSA
122790801 5272 Eudicot View MSA
122045514 5273 Angiosperm View MSA
121347003 5274 Embryophyte View MSA
123426570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier