Gene : Brara.E00712 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11709:SF93 - LACCASE-10-RELATED Genomic Order:  712
Name:  ? Brara.E00712 Secondary Identifier:  ? PAC:30624386
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00712 0.5kb upstream 0.5kb upstream 3690 true A05: 4189735-4193424 Brassica rapa FPsc
Brara.E00712 0.5kb upstream 0.5kb upstream 500 false A05: 4192925-4193424 Brassica rapa FPsc
Brara.E00712 0.5kb downstream 0.5kb downstream 3690 true A05: 4189235-4192924 Brassica rapa FPsc
Brara.E00712 0.5kb downstream 0.5kb downstream 500 false A05: 4189235-4189734 Brassica rapa FPsc
Brara.E00712 1.0kb upstream 1.0kb upstream 4190 true A05: 4189735-4193924 Brassica rapa FPsc
Brara.E00712 1.0kb upstream 1.0kb upstream 1000 false A05: 4192925-4193924 Brassica rapa FPsc
Brara.E00712 1.0kb downstream 1.0kb downstream 4190 true A05: 4188735-4192924 Brassica rapa FPsc
Brara.E00712 1.0kb downstream 1.0kb downstream 1000 false A05: 4188735-4189734 Brassica rapa FPsc
Brara.E00712 2.0kb upstream 2.0kb upstream 5190 true A05: 4189735-4194924 Brassica rapa FPsc
Brara.E00712 2.0kb upstream 2.0kb upstream 2000 false A05: 4192925-4194924 Brassica rapa FPsc
Brara.E00712 2.0kb downstream 2.0kb downstream 5190 true A05: 4187735-4192924 Brassica rapa FPsc
Brara.E00712 2.0kb downstream 2.0kb downstream 2000 false A05: 4187735-4189734 Brassica rapa FPsc
Brara.E00712 5.0kb upstream 5.0kb upstream 8190 true A05: 4189735-4197924 Brassica rapa FPsc
Brara.E00712 5.0kb upstream 5.0kb upstream 5000 false A05: 4192925-4197924 Brassica rapa FPsc
Brara.E00712 5.0kb downstream 5.0kb downstream 8190 true A05: 4184735-4192924 Brassica rapa FPsc
Brara.E00712 5.0kb downstream 5.0kb downstream 5000 false A05: 4184735-4189734 Brassica rapa FPsc
Brara.E00712 10.0kb upstream 10.0kb upstream 13190 true A05: 4189735-4202924 Brassica rapa FPsc
Brara.E00712 10.0kb upstream 10.0kb upstream 10000 false A05: 4192925-4202924 Brassica rapa FPsc
Brara.E00712 10.0kb downstream 10.0kb downstream 13190 true A05: 4179735-4192924 Brassica rapa FPsc
Brara.E00712 10.0kb downstream 10.0kb downstream 10000 false A05: 4179735-4189734 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349349 5261 Brassicaceae Singleton cluster - no MSA
123788549 5264 Brassicales-Malvales Singleton cluster - no MSA
124286575 5266 SBM Singleton cluster - no MSA
124253536 5268 Malvidae View MSA
124074163 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier