Gene : Brara.I00639 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Genomic Order:  639
Name:  ? Brara.I00639 Secondary Identifier:  ? PAC:30646049
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00639 0.5kb upstream 0.5kb upstream 5242 true A09: 3589623-3594864 Brassica rapa FPsc
Brara.I00639 0.5kb upstream 0.5kb upstream 500 false A09: 3594365-3594864 Brassica rapa FPsc
Brara.I00639 0.5kb downstream 0.5kb downstream 5242 true A09: 3589123-3594364 Brassica rapa FPsc
Brara.I00639 0.5kb downstream 0.5kb downstream 500 false A09: 3589123-3589622 Brassica rapa FPsc
Brara.I00639 1.0kb upstream 1.0kb upstream 5742 true A09: 3589623-3595364 Brassica rapa FPsc
Brara.I00639 1.0kb upstream 1.0kb upstream 1000 false A09: 3594365-3595364 Brassica rapa FPsc
Brara.I00639 1.0kb downstream 1.0kb downstream 5742 true A09: 3588623-3594364 Brassica rapa FPsc
Brara.I00639 1.0kb downstream 1.0kb downstream 1000 false A09: 3588623-3589622 Brassica rapa FPsc
Brara.I00639 2.0kb upstream 2.0kb upstream 6742 true A09: 3589623-3596364 Brassica rapa FPsc
Brara.I00639 2.0kb upstream 2.0kb upstream 2000 false A09: 3594365-3596364 Brassica rapa FPsc
Brara.I00639 2.0kb downstream 2.0kb downstream 6742 true A09: 3587623-3594364 Brassica rapa FPsc
Brara.I00639 2.0kb downstream 2.0kb downstream 2000 false A09: 3587623-3589622 Brassica rapa FPsc
Brara.I00639 5.0kb upstream 5.0kb upstream 9742 true A09: 3589623-3599364 Brassica rapa FPsc
Brara.I00639 5.0kb upstream 5.0kb upstream 5000 false A09: 3594365-3599364 Brassica rapa FPsc
Brara.I00639 5.0kb downstream 5.0kb downstream 9742 true A09: 3584623-3594364 Brassica rapa FPsc
Brara.I00639 5.0kb downstream 5.0kb downstream 5000 false A09: 3584623-3589622 Brassica rapa FPsc
Brara.I00639 10.0kb upstream 10.0kb upstream 14742 true A09: 3589623-3604364 Brassica rapa FPsc
Brara.I00639 10.0kb upstream 10.0kb upstream 10000 false A09: 3594365-3604364 Brassica rapa FPsc
Brara.I00639 10.0kb downstream 10.0kb downstream 14742 true A09: 3579623-3594364 Brassica rapa FPsc
Brara.I00639 10.0kb downstream 10.0kb downstream 10000 false A09: 3579623-3589622 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122354560 5261 Brassicaceae Singleton cluster - no MSA
123792938 5264 Brassicales-Malvales Singleton cluster - no MSA
124290797 5266 SBM Singleton cluster - no MSA
124143869 5268 Malvidae Singleton cluster - no MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier