Gene : Brara.B02167 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR21669 - CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS Genomic Order:  2167
Name:  ? Brara.B02167 Secondary Identifier:  ? PAC:30608660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02167 0.5kb upstream 0.5kb upstream 5379 true A02: 13649998-13655376 Brassica rapa FPsc
Brara.B02167 0.5kb upstream 0.5kb upstream 500 false A02: 13654877-13655376 Brassica rapa FPsc
Brara.B02167 0.5kb downstream 0.5kb downstream 5379 true A02: 13649498-13654876 Brassica rapa FPsc
Brara.B02167 0.5kb downstream 0.5kb downstream 500 false A02: 13649498-13649997 Brassica rapa FPsc
Brara.B02167 1.0kb upstream 1.0kb upstream 5879 true A02: 13649998-13655876 Brassica rapa FPsc
Brara.B02167 1.0kb upstream 1.0kb upstream 1000 false A02: 13654877-13655876 Brassica rapa FPsc
Brara.B02167 1.0kb downstream 1.0kb downstream 5879 true A02: 13648998-13654876 Brassica rapa FPsc
Brara.B02167 1.0kb downstream 1.0kb downstream 1000 false A02: 13648998-13649997 Brassica rapa FPsc
Brara.B02167 2.0kb upstream 2.0kb upstream 6879 true A02: 13649998-13656876 Brassica rapa FPsc
Brara.B02167 2.0kb upstream 2.0kb upstream 2000 false A02: 13654877-13656876 Brassica rapa FPsc
Brara.B02167 2.0kb downstream 2.0kb downstream 6879 true A02: 13647998-13654876 Brassica rapa FPsc
Brara.B02167 2.0kb downstream 2.0kb downstream 2000 false A02: 13647998-13649997 Brassica rapa FPsc
Brara.B02167 5.0kb upstream 5.0kb upstream 9879 true A02: 13649998-13659876 Brassica rapa FPsc
Brara.B02167 5.0kb upstream 5.0kb upstream 5000 false A02: 13654877-13659876 Brassica rapa FPsc
Brara.B02167 5.0kb downstream 5.0kb downstream 9879 true A02: 13644998-13654876 Brassica rapa FPsc
Brara.B02167 5.0kb downstream 5.0kb downstream 5000 false A02: 13644998-13649997 Brassica rapa FPsc
Brara.B02167 10.0kb upstream 10.0kb upstream 14879 true A02: 13649998-13664876 Brassica rapa FPsc
Brara.B02167 10.0kb upstream 10.0kb upstream 10000 false A02: 13654877-13664876 Brassica rapa FPsc
Brara.B02167 10.0kb downstream 10.0kb downstream 14879 true A02: 13639998-13654876 Brassica rapa FPsc
Brara.B02167 10.0kb downstream 10.0kb downstream 10000 false A02: 13639998-13649997 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345052 5261 Brassicaceae Singleton cluster - no MSA
123784962 5264 Brassicales-Malvales Singleton cluster - no MSA
124283120 5266 SBM Singleton cluster - no MSA
124137584 5268 Malvidae Singleton cluster - no MSA
123865277 5270 Rosid Singleton cluster - no MSA
123450481 5271 Pentapetalae Singleton cluster - no MSA
122486003 5272 Eudicot Singleton cluster - no MSA
122045408 5273 Angiosperm View MSA
121344687 5274 Embryophyte View MSA
123380086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier