Gene : Brara.I00564 B. rapa FPsc v1.3
Defline:  (1 of 12) PF11891 - Domain of unknown function (DUF3411) (DUF3411) Genomic Order:  564
Name:  ? Brara.I00564 Secondary Identifier:  ? PAC:30645546
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00564 0.5kb upstream 0.5kb upstream 3356 true A09: 3156953-3160308 Brassica rapa FPsc
Brara.I00564 0.5kb upstream 0.5kb upstream 500 false A09: 3156953-3157452 Brassica rapa FPsc
Brara.I00564 0.5kb downstream 0.5kb downstream 3356 true A09: 3157453-3160808 Brassica rapa FPsc
Brara.I00564 0.5kb downstream 0.5kb downstream 500 false A09: 3160309-3160808 Brassica rapa FPsc
Brara.I00564 1.0kb upstream 1.0kb upstream 3856 true A09: 3156453-3160308 Brassica rapa FPsc
Brara.I00564 1.0kb upstream 1.0kb upstream 1000 false A09: 3156453-3157452 Brassica rapa FPsc
Brara.I00564 1.0kb downstream 1.0kb downstream 3856 true A09: 3157453-3161308 Brassica rapa FPsc
Brara.I00564 1.0kb downstream 1.0kb downstream 1000 false A09: 3160309-3161308 Brassica rapa FPsc
Brara.I00564 2.0kb upstream 2.0kb upstream 4856 true A09: 3155453-3160308 Brassica rapa FPsc
Brara.I00564 2.0kb upstream 2.0kb upstream 2000 false A09: 3155453-3157452 Brassica rapa FPsc
Brara.I00564 2.0kb downstream 2.0kb downstream 4856 true A09: 3157453-3162308 Brassica rapa FPsc
Brara.I00564 2.0kb downstream 2.0kb downstream 2000 false A09: 3160309-3162308 Brassica rapa FPsc
Brara.I00564 5.0kb upstream 5.0kb upstream 7856 true A09: 3152453-3160308 Brassica rapa FPsc
Brara.I00564 5.0kb upstream 5.0kb upstream 5000 false A09: 3152453-3157452 Brassica rapa FPsc
Brara.I00564 5.0kb downstream 5.0kb downstream 7856 true A09: 3157453-3165308 Brassica rapa FPsc
Brara.I00564 5.0kb downstream 5.0kb downstream 5000 false A09: 3160309-3165308 Brassica rapa FPsc
Brara.I00564 10.0kb upstream 10.0kb upstream 12856 true A09: 3147453-3160308 Brassica rapa FPsc
Brara.I00564 10.0kb upstream 10.0kb upstream 10000 false A09: 3147453-3157452 Brassica rapa FPsc
Brara.I00564 10.0kb downstream 10.0kb downstream 12856 true A09: 3157453-3170308 Brassica rapa FPsc
Brara.I00564 10.0kb downstream 10.0kb downstream 10000 false A09: 3160309-3170308 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041223 5273 Angiosperm View MSA
122354428 5261 Brassicaceae Singleton cluster - no MSA
123792828 5264 Brassicales-Malvales Singleton cluster - no MSA
124290691 5266 SBM Singleton cluster - no MSA
124251523 5268 Malvidae View MSA
124061192 5270 Rosid View MSA
123751024 5271 Pentapetalae View MSA
122790871 5272 Eudicot View MSA
121346356 5274 Embryophyte View MSA
123428208 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier