Gene : Brara.I00218 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  218
Name:  ? Brara.I00218 Secondary Identifier:  ? PAC:30642863
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00218 0.5kb upstream 0.5kb upstream 2220 true A09: 1224703-1226922 Brassica rapa FPsc
Brara.I00218 0.5kb upstream 0.5kb upstream 500 false A09: 1224703-1225202 Brassica rapa FPsc
Brara.I00218 0.5kb downstream 0.5kb downstream 2220 true A09: 1225203-1227422 Brassica rapa FPsc
Brara.I00218 0.5kb downstream 0.5kb downstream 500 false A09: 1226923-1227422 Brassica rapa FPsc
Brara.I00218 1.0kb upstream 1.0kb upstream 2720 true A09: 1224203-1226922 Brassica rapa FPsc
Brara.I00218 1.0kb upstream 1.0kb upstream 1000 false A09: 1224203-1225202 Brassica rapa FPsc
Brara.I00218 1.0kb downstream 1.0kb downstream 2720 true A09: 1225203-1227922 Brassica rapa FPsc
Brara.I00218 1.0kb downstream 1.0kb downstream 1000 false A09: 1226923-1227922 Brassica rapa FPsc
Brara.I00218 2.0kb upstream 2.0kb upstream 3720 true A09: 1223203-1226922 Brassica rapa FPsc
Brara.I00218 2.0kb upstream 2.0kb upstream 2000 false A09: 1223203-1225202 Brassica rapa FPsc
Brara.I00218 2.0kb downstream 2.0kb downstream 3720 true A09: 1225203-1228922 Brassica rapa FPsc
Brara.I00218 2.0kb downstream 2.0kb downstream 2000 false A09: 1226923-1228922 Brassica rapa FPsc
Brara.I00218 5.0kb upstream 5.0kb upstream 6720 true A09: 1220203-1226922 Brassica rapa FPsc
Brara.I00218 5.0kb upstream 5.0kb upstream 5000 false A09: 1220203-1225202 Brassica rapa FPsc
Brara.I00218 5.0kb downstream 5.0kb downstream 6720 true A09: 1225203-1231922 Brassica rapa FPsc
Brara.I00218 5.0kb downstream 5.0kb downstream 5000 false A09: 1226923-1231922 Brassica rapa FPsc
Brara.I00218 10.0kb upstream 10.0kb upstream 11720 true A09: 1215203-1226922 Brassica rapa FPsc
Brara.I00218 10.0kb upstream 10.0kb upstream 10000 false A09: 1215203-1225202 Brassica rapa FPsc
Brara.I00218 10.0kb downstream 10.0kb downstream 11720 true A09: 1225203-1236922 Brassica rapa FPsc
Brara.I00218 10.0kb downstream 10.0kb downstream 10000 false A09: 1226923-1236922 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377793 5261 Brassicaceae View MSA
123831988 5264 Brassicales-Malvales View MSA
124337057 5266 SBM View MSA
124239989 5268 Malvidae View MSA
124073060 5270 Rosid View MSA
123737463 5271 Pentapetalae View MSA
122790798 5272 Eudicot View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier