Gene : Brara.I00838 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12219 - NADH-UBIQUINONE OXIDOREDUCTASE Genomic Order:  838
Name:  ? Brara.I00838 Secondary Identifier:  ? PAC:30645006
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4302 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5083 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00838 0.5kb upstream 0.5kb upstream 1697 true A09: 4676694-4678390 Brassica rapa FPsc
Brara.I00838 0.5kb upstream 0.5kb upstream 500 false A09: 4677891-4678390 Brassica rapa FPsc
Brara.I00838 0.5kb downstream 0.5kb downstream 1697 true A09: 4676194-4677890 Brassica rapa FPsc
Brara.I00838 0.5kb downstream 0.5kb downstream 500 false A09: 4676194-4676693 Brassica rapa FPsc
Brara.I00838 1.0kb upstream 1.0kb upstream 2197 true A09: 4676694-4678890 Brassica rapa FPsc
Brara.I00838 1.0kb upstream 1.0kb upstream 1000 false A09: 4677891-4678890 Brassica rapa FPsc
Brara.I00838 1.0kb downstream 1.0kb downstream 2197 true A09: 4675694-4677890 Brassica rapa FPsc
Brara.I00838 1.0kb downstream 1.0kb downstream 1000 false A09: 4675694-4676693 Brassica rapa FPsc
Brara.I00838 2.0kb upstream 2.0kb upstream 3197 true A09: 4676694-4679890 Brassica rapa FPsc
Brara.I00838 2.0kb upstream 2.0kb upstream 2000 false A09: 4677891-4679890 Brassica rapa FPsc
Brara.I00838 2.0kb downstream 2.0kb downstream 3197 true A09: 4674694-4677890 Brassica rapa FPsc
Brara.I00838 2.0kb downstream 2.0kb downstream 2000 false A09: 4674694-4676693 Brassica rapa FPsc
Brara.I00838 5.0kb upstream 5.0kb upstream 6197 true A09: 4676694-4682890 Brassica rapa FPsc
Brara.I00838 5.0kb upstream 5.0kb upstream 5000 false A09: 4677891-4682890 Brassica rapa FPsc
Brara.I00838 5.0kb downstream 5.0kb downstream 6197 true A09: 4671694-4677890 Brassica rapa FPsc
Brara.I00838 5.0kb downstream 5.0kb downstream 5000 false A09: 4671694-4676693 Brassica rapa FPsc
Brara.I00838 10.0kb upstream 10.0kb upstream 11197 true A09: 4676694-4687890 Brassica rapa FPsc
Brara.I00838 10.0kb upstream 10.0kb upstream 10000 false A09: 4677891-4687890 Brassica rapa FPsc
Brara.I00838 10.0kb downstream 10.0kb downstream 11197 true A09: 4666694-4677890 Brassica rapa FPsc
Brara.I00838 10.0kb downstream 10.0kb downstream 10000 false A09: 4666694-4676693 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376854 5261 Brassicaceae View MSA
123832720 5264 Brassicales-Malvales View MSA
124343584 5266 SBM View MSA
124248508 5268 Malvidae View MSA
124063322 5270 Rosid View MSA
123738055 5271 Pentapetalae View MSA
122794189 5272 Eudicot View MSA
122045694 5273 Angiosperm View MSA
121345642 5274 Embryophyte View MSA
123424556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier