Gene : Brara.I00162 B. rapa FPsc v1.3
Defline:  (1 of 20) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase Genomic Order:  162
Name:  ? Brara.I00162 Secondary Identifier:  ? PAC:30643576
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5936 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00162 0.5kb upstream 0.5kb upstream 2625 true A09: 948342-950966 Brassica rapa FPsc
Brara.I00162 0.5kb upstream 0.5kb upstream 500 false A09: 948342-948841 Brassica rapa FPsc
Brara.I00162 0.5kb downstream 0.5kb downstream 2625 true A09: 948842-951466 Brassica rapa FPsc
Brara.I00162 0.5kb downstream 0.5kb downstream 500 false A09: 950967-951466 Brassica rapa FPsc
Brara.I00162 1.0kb upstream 1.0kb upstream 3125 true A09: 947842-950966 Brassica rapa FPsc
Brara.I00162 1.0kb upstream 1.0kb upstream 1000 false A09: 947842-948841 Brassica rapa FPsc
Brara.I00162 1.0kb downstream 1.0kb downstream 3125 true A09: 948842-951966 Brassica rapa FPsc
Brara.I00162 1.0kb downstream 1.0kb downstream 1000 false A09: 950967-951966 Brassica rapa FPsc
Brara.I00162 2.0kb upstream 2.0kb upstream 4125 true A09: 946842-950966 Brassica rapa FPsc
Brara.I00162 2.0kb upstream 2.0kb upstream 2000 false A09: 946842-948841 Brassica rapa FPsc
Brara.I00162 2.0kb downstream 2.0kb downstream 4125 true A09: 948842-952966 Brassica rapa FPsc
Brara.I00162 2.0kb downstream 2.0kb downstream 2000 false A09: 950967-952966 Brassica rapa FPsc
Brara.I00162 5.0kb upstream 5.0kb upstream 7125 true A09: 943842-950966 Brassica rapa FPsc
Brara.I00162 5.0kb upstream 5.0kb upstream 5000 false A09: 943842-948841 Brassica rapa FPsc
Brara.I00162 5.0kb downstream 5.0kb downstream 7125 true A09: 948842-955966 Brassica rapa FPsc
Brara.I00162 5.0kb downstream 5.0kb downstream 5000 false A09: 950967-955966 Brassica rapa FPsc
Brara.I00162 10.0kb upstream 10.0kb upstream 12125 true A09: 938842-950966 Brassica rapa FPsc
Brara.I00162 10.0kb upstream 10.0kb upstream 10000 false A09: 938842-948841 Brassica rapa FPsc
Brara.I00162 10.0kb downstream 10.0kb downstream 12125 true A09: 948842-960966 Brassica rapa FPsc
Brara.I00162 10.0kb downstream 10.0kb downstream 10000 false A09: 950967-960966 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378402 5261 Brassicaceae View MSA
123833472 5264 Brassicales-Malvales View MSA
124339455 5266 SBM View MSA
124245005 5268 Malvidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier