Gene : Brara.B01941 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR24326:SF114 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17-RELATED Genomic Order:  1941
Name:  ? Brara.B01941 Secondary Identifier:  ? PAC:30609531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01941 0.5kb upstream 0.5kb upstream 2995 true A02: 11917956-11920950 Brassica rapa FPsc
Brara.B01941 0.5kb upstream 0.5kb upstream 500 false A02: 11917956-11918455 Brassica rapa FPsc
Brara.B01941 0.5kb downstream 0.5kb downstream 2995 true A02: 11918456-11921450 Brassica rapa FPsc
Brara.B01941 0.5kb downstream 0.5kb downstream 500 false A02: 11920951-11921450 Brassica rapa FPsc
Brara.B01941 1.0kb upstream 1.0kb upstream 3495 true A02: 11917456-11920950 Brassica rapa FPsc
Brara.B01941 1.0kb upstream 1.0kb upstream 1000 false A02: 11917456-11918455 Brassica rapa FPsc
Brara.B01941 1.0kb downstream 1.0kb downstream 3495 true A02: 11918456-11921950 Brassica rapa FPsc
Brara.B01941 1.0kb downstream 1.0kb downstream 1000 false A02: 11920951-11921950 Brassica rapa FPsc
Brara.B01941 2.0kb upstream 2.0kb upstream 4495 true A02: 11916456-11920950 Brassica rapa FPsc
Brara.B01941 2.0kb upstream 2.0kb upstream 2000 false A02: 11916456-11918455 Brassica rapa FPsc
Brara.B01941 2.0kb downstream 2.0kb downstream 4495 true A02: 11918456-11922950 Brassica rapa FPsc
Brara.B01941 2.0kb downstream 2.0kb downstream 2000 false A02: 11920951-11922950 Brassica rapa FPsc
Brara.B01941 5.0kb upstream 5.0kb upstream 7495 true A02: 11913456-11920950 Brassica rapa FPsc
Brara.B01941 5.0kb upstream 5.0kb upstream 5000 false A02: 11913456-11918455 Brassica rapa FPsc
Brara.B01941 5.0kb downstream 5.0kb downstream 7495 true A02: 11918456-11925950 Brassica rapa FPsc
Brara.B01941 5.0kb downstream 5.0kb downstream 5000 false A02: 11920951-11925950 Brassica rapa FPsc
Brara.B01941 10.0kb upstream 10.0kb upstream 12495 true A02: 11908456-11920950 Brassica rapa FPsc
Brara.B01941 10.0kb upstream 10.0kb upstream 10000 false A02: 11908456-11918455 Brassica rapa FPsc
Brara.B01941 10.0kb downstream 10.0kb downstream 12495 true A02: 11918456-11930950 Brassica rapa FPsc
Brara.B01941 10.0kb downstream 10.0kb downstream 10000 false A02: 11920951-11930950 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345320 5261 Brassicaceae Singleton cluster - no MSA
123785187 5264 Brassicales-Malvales Singleton cluster - no MSA
124283339 5266 SBM Singleton cluster - no MSA
124137759 5268 Malvidae Singleton cluster - no MSA
123865428 5270 Rosid Singleton cluster - no MSA
123450609 5271 Pentapetalae Singleton cluster - no MSA
122797113 5272 Eudicot View MSA
122043928 5273 Angiosperm View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier