Gene : Brara.H03089 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13829 - SNRNP CORE PROTEIN FAMILY MEMBER Genomic Order:  3089
Name:  ? Brara.H03089 Secondary Identifier:  ? PAC:30649698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H03089 0.5kb upstream 0.5kb upstream 1350 true A08: 22996743-22998092 Brassica rapa FPsc
Brara.H03089 0.5kb upstream 0.5kb upstream 500 false A08: 22996743-22997242 Brassica rapa FPsc
Brara.H03089 0.5kb downstream 0.5kb downstream 1350 true A08: 22997243-22998592 Brassica rapa FPsc
Brara.H03089 0.5kb downstream 0.5kb downstream 500 false A08: 22998093-22998592 Brassica rapa FPsc
Brara.H03089 1.0kb upstream 1.0kb upstream 1850 true A08: 22996243-22998092 Brassica rapa FPsc
Brara.H03089 1.0kb upstream 1.0kb upstream 1000 false A08: 22996243-22997242 Brassica rapa FPsc
Brara.H03089 1.0kb downstream 1.0kb downstream 1850 true A08: 22997243-22999092 Brassica rapa FPsc
Brara.H03089 1.0kb downstream 1.0kb downstream 1000 false A08: 22998093-22999092 Brassica rapa FPsc
Brara.H03089 2.0kb upstream 2.0kb upstream 2850 true A08: 22995243-22998092 Brassica rapa FPsc
Brara.H03089 2.0kb upstream 2.0kb upstream 2000 false A08: 22995243-22997242 Brassica rapa FPsc
Brara.H03089 2.0kb downstream 2.0kb downstream 2850 true A08: 22997243-23000092 Brassica rapa FPsc
Brara.H03089 2.0kb downstream 2.0kb downstream 2000 false A08: 22998093-23000092 Brassica rapa FPsc
Brara.H03089 5.0kb upstream 5.0kb upstream 5850 true A08: 22992243-22998092 Brassica rapa FPsc
Brara.H03089 5.0kb upstream 5.0kb upstream 5000 false A08: 22992243-22997242 Brassica rapa FPsc
Brara.H03089 5.0kb downstream 5.0kb downstream 5850 true A08: 22997243-23003092 Brassica rapa FPsc
Brara.H03089 5.0kb downstream 5.0kb downstream 5000 false A08: 22998093-23003092 Brassica rapa FPsc
Brara.H03089 10.0kb upstream 10.0kb upstream 10850 true A08: 22987243-22998092 Brassica rapa FPsc
Brara.H03089 10.0kb upstream 10.0kb upstream 10000 false A08: 22987243-22997242 Brassica rapa FPsc
Brara.H03089 10.0kb downstream 10.0kb downstream 10850 true A08: 22997243-23008092 Brassica rapa FPsc
Brara.H03089 10.0kb downstream 10.0kb downstream 10000 false A08: 22998093-23008092 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121507672 5273 Angiosperm Singleton cluster - no MSA
122355590 5261 Brassicaceae Singleton cluster - no MSA
123793809 5264 Brassicales-Malvales Singleton cluster - no MSA
124291634 5266 SBM Singleton cluster - no MSA
124144555 5268 Malvidae Singleton cluster - no MSA
123871089 5270 Rosid Singleton cluster - no MSA
123455383 5271 Pentapetalae Singleton cluster - no MSA
122490818 5272 Eudicot Singleton cluster - no MSA
120780825 5274 Embryophyte Singleton cluster - no MSA
122822900 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier