Gene : Brara.B01974 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11206:SF75 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  1974
Name:  ? Brara.B01974 Secondary Identifier:  ? PAC:30608311
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01974 0.5kb upstream 0.5kb upstream 2340 true A02: 12155001-12157340 Brassica rapa FPsc
Brara.B01974 0.5kb upstream 0.5kb upstream 500 false A02: 12156841-12157340 Brassica rapa FPsc
Brara.B01974 0.5kb downstream 0.5kb downstream 2340 true A02: 12154501-12156840 Brassica rapa FPsc
Brara.B01974 0.5kb downstream 0.5kb downstream 500 false A02: 12154501-12155000 Brassica rapa FPsc
Brara.B01974 1.0kb upstream 1.0kb upstream 2840 true A02: 12155001-12157840 Brassica rapa FPsc
Brara.B01974 1.0kb upstream 1.0kb upstream 1000 false A02: 12156841-12157840 Brassica rapa FPsc
Brara.B01974 1.0kb downstream 1.0kb downstream 2840 true A02: 12154001-12156840 Brassica rapa FPsc
Brara.B01974 1.0kb downstream 1.0kb downstream 1000 false A02: 12154001-12155000 Brassica rapa FPsc
Brara.B01974 2.0kb upstream 2.0kb upstream 3840 true A02: 12155001-12158840 Brassica rapa FPsc
Brara.B01974 2.0kb upstream 2.0kb upstream 2000 false A02: 12156841-12158840 Brassica rapa FPsc
Brara.B01974 2.0kb downstream 2.0kb downstream 3840 true A02: 12153001-12156840 Brassica rapa FPsc
Brara.B01974 2.0kb downstream 2.0kb downstream 2000 false A02: 12153001-12155000 Brassica rapa FPsc
Brara.B01974 5.0kb upstream 5.0kb upstream 6840 true A02: 12155001-12161840 Brassica rapa FPsc
Brara.B01974 5.0kb upstream 5.0kb upstream 5000 false A02: 12156841-12161840 Brassica rapa FPsc
Brara.B01974 5.0kb downstream 5.0kb downstream 6840 true A02: 12150001-12156840 Brassica rapa FPsc
Brara.B01974 5.0kb downstream 5.0kb downstream 5000 false A02: 12150001-12155000 Brassica rapa FPsc
Brara.B01974 10.0kb upstream 10.0kb upstream 11840 true A02: 12155001-12166840 Brassica rapa FPsc
Brara.B01974 10.0kb upstream 10.0kb upstream 10000 false A02: 12156841-12166840 Brassica rapa FPsc
Brara.B01974 10.0kb downstream 10.0kb downstream 11840 true A02: 12145001-12156840 Brassica rapa FPsc
Brara.B01974 10.0kb downstream 10.0kb downstream 10000 false A02: 12145001-12155000 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344945 5261 Brassicaceae Singleton cluster - no MSA
123784869 5264 Brassicales-Malvales Singleton cluster - no MSA
124283030 5266 SBM Singleton cluster - no MSA
124137505 5268 Malvidae Singleton cluster - no MSA
124062367 5270 Rosid View MSA
123750437 5271 Pentapetalae View MSA
122790105 5272 Eudicot View MSA
122045079 5273 Angiosperm View MSA
121345520 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier