Gene : Brara.H03117 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR21320:SF3 - CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIAL Genomic Order:  3117
Name:  ? Brara.H03117 Secondary Identifier:  ? PAC:30649797
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H03117 0.5kb upstream 0.5kb upstream 2554 true A08: 23094171-23096724 Brassica rapa FPsc
Brara.H03117 0.5kb upstream 0.5kb upstream 500 false A08: 23096225-23096724 Brassica rapa FPsc
Brara.H03117 0.5kb downstream 0.5kb downstream 2554 true A08: 23093671-23096224 Brassica rapa FPsc
Brara.H03117 0.5kb downstream 0.5kb downstream 500 false A08: 23093671-23094170 Brassica rapa FPsc
Brara.H03117 1.0kb upstream 1.0kb upstream 3054 true A08: 23094171-23097224 Brassica rapa FPsc
Brara.H03117 1.0kb upstream 1.0kb upstream 1000 false A08: 23096225-23097224 Brassica rapa FPsc
Brara.H03117 1.0kb downstream 1.0kb downstream 3054 true A08: 23093171-23096224 Brassica rapa FPsc
Brara.H03117 1.0kb downstream 1.0kb downstream 1000 false A08: 23093171-23094170 Brassica rapa FPsc
Brara.H03117 2.0kb upstream 2.0kb upstream 4054 true A08: 23094171-23098224 Brassica rapa FPsc
Brara.H03117 2.0kb upstream 2.0kb upstream 2000 false A08: 23096225-23098224 Brassica rapa FPsc
Brara.H03117 2.0kb downstream 2.0kb downstream 4054 true A08: 23092171-23096224 Brassica rapa FPsc
Brara.H03117 2.0kb downstream 2.0kb downstream 2000 false A08: 23092171-23094170 Brassica rapa FPsc
Brara.H03117 5.0kb upstream 5.0kb upstream 7054 true A08: 23094171-23101224 Brassica rapa FPsc
Brara.H03117 5.0kb upstream 5.0kb upstream 5000 false A08: 23096225-23101224 Brassica rapa FPsc
Brara.H03117 5.0kb downstream 5.0kb downstream 7054 true A08: 23089171-23096224 Brassica rapa FPsc
Brara.H03117 5.0kb downstream 5.0kb downstream 5000 false A08: 23089171-23094170 Brassica rapa FPsc
Brara.H03117 10.0kb upstream 10.0kb upstream 12054 true A08: 23094171-23106224 Brassica rapa FPsc
Brara.H03117 10.0kb upstream 10.0kb upstream 10000 false A08: 23096225-23106224 Brassica rapa FPsc
Brara.H03117 10.0kb downstream 10.0kb downstream 12054 true A08: 23084171-23096224 Brassica rapa FPsc
Brara.H03117 10.0kb downstream 10.0kb downstream 10000 false A08: 23084171-23094170 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355624 5261 Brassicaceae Singleton cluster - no MSA
123793832 5264 Brassicales-Malvales Singleton cluster - no MSA
124291656 5266 SBM Singleton cluster - no MSA
124250722 5268 Malvidae View MSA
124061652 5270 Rosid View MSA
123747181 5271 Pentapetalae View MSA
122787948 5272 Eudicot View MSA
122044344 5273 Angiosperm View MSA
121347524 5274 Embryophyte View MSA
123425070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier